RNA id: TU195961



Basic Information


Item Value
RNA id TU195961
length 713
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G132674
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 13104879 ~ 13105591 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACAGTGGTGCTCTGGAAGATTTCGTGGCTGTACACCCATCCCGTCTCGCAGGTTGAGCGCGCGCTGCGGTTCTTTCCCGAAACGGCTGCGCACGAGTCCGCGCGTCCCGGCAGAAGGGCGATGCTCAGGTTCCCGAAAGTAAGAGACGCGTCCTCCGTCCCTGGACCCCGACAACGGTGGGGCGGCGTGGCGCCCGTGAAGACGCTCGCCATCATGTGAAACGCGAGAAAGATCTGCGGTAGACATATCCACACATACAAAAGCTTCTGGTATCTCCCGAAGCCACCGACTGTGGCCAGCAGCTGATCAAAATTCATTCCCGACCTTGGAAAAACAAGTCTCGAGGCGAATGAGCCGTCACGCCCCCATCAACAAAATACAGTGGCGATCAAAATTAACGTAGATTTCTGAATATATGGCAGAAATacaaattgtgtgtttttacatcCAGGAGAAAGCTCAATAACACATATTTACGCGGCACGTGCCACTGTGTTGTTGCTCTAAAACATCatcttaaaattatatttgcgGCTTAAAAAGACGCCCAGACAAATCCCGATCAAAGCACAAAGGCAATTAAAAGCCCAAACAAGTCAAAGTGAGCTGATGTCCACTTTCCAGGCGCCTATATTTCCACGACAGATCTGGTTTGACCGACGAGAAAGGAGCGGACCGAGCACCGCCGCGTCGCCTTCACTCTTTCGACCAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU195948 lncRNA downstream 45569 13054785 ~ 13059310 (-) True G132665
TU195950 lncRNA downstream 45569 13054785 ~ 13059310 (-) False G132665
TU195951 lncRNA downstream 45569 13054785 ~ 13059310 (-) False G132665
TU195946 lncRNA downstream 58256 13046373 ~ 13046623 (-) True G132664
TU195944 lncRNA downstream 72753 13031837 ~ 13032126 (-) True G132662
TU195962 lncRNA upstream 1322 13106913 ~ 13107133 (-) True G132675
TU195981 lncRNA upstream 37712 13143303 ~ 13143621 (-) True G132682
TU196024 lncRNA upstream 133098 13238689 ~ 13328384 (-) True G132709
TU196047 lncRNA upstream 149245 13254836 ~ 13256019 (-) True G132726
TU196052 lncRNA upstream 168372 13273963 ~ 13276574 (-) True G132729
XM_043218089.1 mRNA downstream 1894 13099675 ~ 13102985 (-) True psmb4
XM_043218088.1 mRNA downstream 15449 13086560 ~ 13089430 (-) True zgc:153441
XM_043218145.1 mRNA downstream 18862 13080049 ~ 13086017 (-) True vps45
XM_043218146.1 mRNA downstream 27482 13066508 ~ 13077397 (-) True plekho1a
XM_043217008.1 mRNA downstream 60447 13034497 ~ 13044432 (-) True si:ch211-191i18.2
XM_043217498.1 mRNA upstream 8623 13114214 ~ 13117877 (-) True zgc:110239
XM_043217496.1 mRNA upstream 13721 13119312 ~ 13124815 (-) True LOC122323573
XM_043217497.1 mRNA upstream 13721 13119312 ~ 13121997 (-) False LOC122323573
XM_043217167.1 mRNA upstream 20575 13126166 ~ 13131495 (-) False sytl1
XM_043217166.1 mRNA upstream 20575 13126166 ~ 13131495 (-) True sytl1
TU195943 other downstream 75530 13027817 ~ 13029349 (-) True cart4
TU195819 other downstream 435683 12597774 ~ 12669196 (-) False sem1
TU195818 other downstream 435683 12643964 ~ 12669196 (-) False sem1
TU195817 other downstream 435683 12667264 ~ 12669196 (-) True sem1
TU195513 other downstream 666808 12435779 ~ 12438071 (-) True bet1
TU196058 other upstream 178940 13284531 ~ 13285461 (-) True G132733
TU196152 other upstream 389239 13494830 ~ 13498090 (-) False G132784
TU196165 other upstream 389239 13494830 ~ 13498090 (-) False G132784
TU196166 other upstream 389239 13494830 ~ 13498090 (-) False G132784
TU196164 other upstream 392746 13498337 ~ 13500461 (-) False G132784

Expression Profile