Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU196024 |
| length | 601 |
| lncRNA type | read_through |
| GC content | 0.54 |
| exon number | 3 |
| gene id | G132709 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056717.1 |
| NCBI id | CM032086.1 |
| chromosome length | 20532727 |
| location | 13238689 ~ 13328384 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005768 | endosome | cellular_component |
| GO:0005770 | late endosome | cellular_component |
| GO:0044433 | obsolete cytoplasmic vesicle part | cellular_component |
| GO:0044440 | obsolete endosomal part | cellular_component |
| GO:0031902 | late endosome membrane | cellular_component |
| GO:0097708 | intracellular vesicle | cellular_component |
| GO:0031410 | cytoplasmic vesicle | cellular_component |
| GO:0010008 | endosome membrane | cellular_component |
| GO:0031982 | vesicle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU195981 | lncRNA | downstream | 95068 | 13143303 ~ 13143621 (-) | True | G132682 |
| TU195962 | lncRNA | downstream | 131556 | 13106913 ~ 13107133 (-) | True | G132675 |
| TU195961 | lncRNA | downstream | 133098 | 13104879 ~ 13105591 (-) | True | G132674 |
| TU195948 | lncRNA | downstream | 179379 | 13054785 ~ 13059310 (-) | True | G132665 |
| TU196001 | lncRNA | upstream | 1568 | 13329952 ~ 13336775 (-) | True | G132695 |
| TU196006 | lncRNA | upstream | 1568 | 13329952 ~ 13336775 (-) | False | G132695 |
| TU196180 | lncRNA | upstream | 47499 | 13375883 ~ 13377672 (-) | True | G132795 |
| TU196206 | lncRNA | upstream | 126112 | 13454496 ~ 13479319 (-) | True | G132818 |
| TU196217 | lncRNA | upstream | 155897 | 13484281 ~ 13486189 (-) | True | G132828 |
| XM_043217162.1 | mRNA | downstream | 84467 | 13143789 ~ 13154222 (-) | True | susd5 |
| XM_043218327.1 | mRNA | downstream | 100061 | 13132472 ~ 13138628 (-) | True | fkbp9 |
| XM_043217167.1 | mRNA | downstream | 107194 | 13126166 ~ 13131495 (-) | False | sytl1 |
| XM_043217166.1 | mRNA | downstream | 107194 | 13126166 ~ 13131495 (-) | True | sytl1 |
| XM_043217496.1 | mRNA | downstream | 113874 | 13119312 ~ 13124815 (-) | True | LOC122323573 |
| XM_043217197.1 | mRNA | upstream | 90460 | 13418844 ~ 13421662 (-) | True | gpr186 |
| XM_043217807.1 | mRNA | upstream | 112170 | 13440554 ~ 13450908 (-) | True | fam83hb |
| XM_043218326.1 | mRNA | upstream | 151603 | 13479987 ~ 13482841 (-) | True | ppt1 |
| XM_043218074.1 | mRNA | upstream | 181434 | 13509818 ~ 13516438 (-) | True | klhl43 |
| XM_043217668.1 | mRNA | upstream | 313741 | 13642125 ~ 13643645 (-) | True | LOC122323662 |
| TU195943 | other | downstream | 209340 | 13027817 ~ 13029349 (-) | True | cart4 |
| TU195819 | other | downstream | 569493 | 12597774 ~ 12669196 (-) | False | sem1 |
| TU195818 | other | downstream | 569493 | 12643964 ~ 12669196 (-) | False | sem1 |
| TU195817 | other | downstream | 569493 | 12667264 ~ 12669196 (-) | True | sem1 |
| TU195513 | other | downstream | 800618 | 12435779 ~ 12438071 (-) | True | bet1 |
| TU196152 | other | upstream | 166446 | 13494830 ~ 13498090 (-) | False | G132784 |
| TU196165 | other | upstream | 166446 | 13494830 ~ 13498090 (-) | False | G132784 |
| TU196166 | other | upstream | 166446 | 13494830 ~ 13498090 (-) | False | G132784 |
| TU196164 | other | upstream | 169953 | 13498337 ~ 13500461 (-) | False | G132784 |
| TU196161 | other | upstream | 172735 | 13501119 ~ 13502243 (-) | False | G132784 |
