RNA id: TU197682


Basic Information

Item Value
RNA id TU197682
length 470
RNA type TUCP
GC content 0.42
exon number 2
gene id LOC122324114
representative False

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 16889829 ~ 16890874 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttttatgacTGACAGATCCTGAAGCAAACATGACTTTAATAGCCATCATTATTTGGACACTCACAACATGCCTCTGCAgTTCTTTAGGGCAGGTTCTGACTCAGTCTGAAGATCAAGCAGTGAAGCCTGATCAGACTGTTACTATTCAATGTAAACATGAACCAGCAGTGAACTGTATTAAAGAAACAGGTAGCTCTCAGTATTGCATGTCCTGGTTTCATCAGATTCCTGGAGAACCTCCTAAACTCCTCATTTATGCCACATCAGACAGAGCTTCAGGTGTTTCTTCTAGATTCAGTGGCAGTGAAAGTGGAAACCACATGGATTTTActctgaccatcagtggagtccagCCTGAAGATTCAGGAgtttattactgtcagagtaaACATGACAAGGGAGTCTCTGGCACCACAGACTGGGTGTTCACACAGTGTGAAATCATCATACAAAAACCTGTAGATCATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU197671 lncRNA downstream 7741 16877664 ~ 16882412 (-) False LOC122323645
XR_006247038.1 lncRNA downstream 7754 16867857 ~ 16882399 (-) True LOC122323645
XR_006247037.1 lncRNA downstream 22801 16854238 ~ 16867352 (-) False LOC122323643
TU197712 lncRNA upstream 82640 16973506 ~ 16978942 (-) True G133856
TU197725 lncRNA upstream 83165 16974031 ~ 17041793 (-) True G133865
TU197704 lncRNA upstream 126671 17017537 ~ 17020967 (-) True G133852
TU197741 lncRNA upstream 132380 17023246 ~ 17024514 (-) True G133879
TU197749 lncRNA upstream 165235 17056101 ~ 17056311 (-) True G133886
XM_043218519.1 mRNA downstream 58406 16814826 ~ 16831747 (-) True nudcd1
XM_043217301.1 mRNA downstream 93633 16793249 ~ 16796520 (-) False LOC122323461
XM_043217300.1 mRNA downstream 93636 16793249 ~ 16796517 (-) True LOC122323461
XM_043218348.1 mRNA downstream 106928 16774625 ~ 16783225 (-) True eif3eb
XM_043217274.1 mRNA downstream 167551 16686125 ~ 16722602 (-) False pleca
XM_043217586.1 mRNA upstream 10904 16901770 ~ 16944523 (-) True grb10a
XM_043217990.1 mRNA upstream 68285 16959151 ~ 16966115 (-) True si:ch73-109i22.2
XM_043217989.1 mRNA upstream 68285 16959151 ~ 16966109 (-) False si:ch73-109i22.2
XM_043217318.1 mRNA upstream 151109 17041975 ~ 17042989 (-) True msmp2
XM_043217136.1 mRNA upstream 157673 17048539 ~ 17051619 (-) False si:ch73-347e22.8
TU197679 other downstream 3153 16886460 ~ 16887000 (-) True G133842
TU197676 other downstream 6673 16882994 ~ 16883480 (-) False LOC122323321
unassigned_transcript_2197 other downstream 6679 16882987 ~ 16883474 (-) True LOC122323321
TU197668 other downstream 20589 16856979 ~ 16869564 (-) True G133834
TU197531 other downstream 381593 16500945 ~ 16508560 (-) False mbpa
unassigned_transcript_2200 other upstream 826 16891692 ~ 16892581 (-) True LOC122324112
unassigned_transcript_2202 other upstream 5242 16896108 ~ 16897143 (-) True LOC122324113
unassigned_transcript_2203 other upstream 7129 16897995 ~ 16898601 (-) True LOC122324115
unassigned_transcript_2205 other upstream 9839 16900705 ~ 16900776 (-) True trnap-ugg_15
TU197783 other upstream 326922 17217788 ~ 17218749 (-) False LOC122323474

Expression Profile