RNA id: XM_043216939.1



Basic Information


Item Value
RNA id XM_043216939.1
length 625
RNA type mRNA
GC content 0.46
exon number 4
gene id ndufs6
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 7042113 ~ 7043346 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTAccacaaatgtaaaatatttgaacaaacatataaataaaagaatttagTCGATCTCGACCGGCAGGGGCCGGCAGAGACGCGTTTTCATCGCGCACGCAGCAAAGCAAGGGCTGCTGGGTAATAATCACAGGCAAACATGGCAGCCTCCCTTTCCAGGGTCTTGTCCTTCGGTAAAAACACGAAGGCTTTGCTCAGCGGCTTGAGGTTGTCTGCAGCTCCAGCACAACGATACAGCGTTCAAGTTTCAGATTATGGAGAAAAAATCACCCACACGGGACAGGTCTATGACGAAAATGATGTGAGAAGAGTTAGGTTCGTCGGCAGGCAAAAAGAGGTGAATGAGAACTTTGCAATCAGCTTGGTTGCCGAGGAACCGGTGACAcacacagagtccagagtgGTGTCCTGTGATGGAGGCGGAGGGGCTCTGGGACACCCCAAAGTTTACATCAACTTGGACAAGGAAACCAAAGTGGGCACGTGTGGATACTGTGGGCTCCAGTTTAAGCAGACGCATCATCACTGAAGAACCGTCTTTTTGTCTGTTTGGGCTATTCATAACTCTCCTTTGAATGCATCTAATTCTATTcctgtataataaaatattgctgtAACTTAAAA

Function


GO: NA

KEGG:

id description
K03939 NDUFS6; NADH dehydrogenase (ubiquinone) Fe-S protein 6

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247094.1 lncRNA downstream 156670 6883962 ~ 6885443 (-) True LOC122324041
TU193728 lncRNA downstream 189985 6850369 ~ 6852128 (-) False srd5a1
TU193683 lncRNA downstream 281665 6760174 ~ 6760448 (-) True G131166
TU193682 lncRNA downstream 286678 6754414 ~ 6755435 (-) True G131165
TU193673 lncRNA downstream 334048 6706239 ~ 6708065 (-) True LOC122323439
TU193811 lncRNA upstream 161 7043507 ~ 7044962 (-) True G131265
TU193857 lncRNA upstream 162843 7206189 ~ 7254556 (-) True G131296
TU193873 lncRNA upstream 216949 7260295 ~ 7262610 (-) True G131305
TU193896 lncRNA upstream 310798 7354144 ~ 7355469 (-) False G131318
TU193897 lncRNA upstream 310798 7354144 ~ 7355700 (-) True G131318
XM_043217245.1 mRNA downstream 60687 6977815 ~ 6981426 (-) True irx1b
XM_043217669.1 mRNA downstream 142308 6889271 ~ 6899805 (-) True ube2ql1
XM_043217156.1 mRNA downstream 183453 6851827 ~ 6858660 (-) True srd5a1
XM_043218289.1 mRNA downstream 192426 6834886 ~ 6849687 (-) True tent4a
XM_043218062.1 mRNA upstream 31040 7074386 ~ 7232127 (-) True nrsn1l
XM_043218063.1 mRNA upstream 31040 7074386 ~ 7080750 (-) False nrsn1l
XM_043218061.1 mRNA upstream 31040 7074386 ~ 7079872 (-) False nrsn1l
XM_043217946.1 mRNA upstream 191461 7234807 ~ 7238683 (-) True sox4a
XM_043218005.1 mRNA upstream 314204 7357550 ~ 7360143 (-) False LOC122323893
XR_006247131.1 other downstream 338176 6703871 ~ 6703937 (-) True LOC122324261
XR_006247130.1 other downstream 338724 6703323 ~ 6703389 (-) True LOC122324260
TU193649 other downstream 392724 6648438 ~ 6649389 (-) True polr1h
TU193577 other downstream 402893 6631189 ~ 6639220 (-) False sh3bp5lb
TU193406 other downstream 678941 6362347 ~ 6363172 (-) True G131006
TU193894 other upstream 313275 7356621 ~ 7360111 (-) True LOC122323893
TU193918 other upstream 351834 7395180 ~ 7397946 (-) True LOC122324169
TU193992 other upstream 558787 7602133 ~ 7605143 (-) True G131373
XR_006247052.1 other upstream 1075603 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other upstream 1078166 8121512 ~ 8129258 (-) False khdrbs1b

Expression Profile