RNA id: XM_043217021.1


Basic Information

Item Value
RNA id XM_043217021.1
length 1411
RNA type mRNA
GC content 0.47
exon number 2
gene id LOC122323292
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 9484952 ~ 9491361 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTCCGGTCGACGTTAACAGAAATCCCAGTCTCTTCATAAGGCTGAATCGAGTGTTAATATAATGGAAATCAGCAAACCTCTCTTCACCGAGGCGCTCTCCGCTATTCTGGGAGTCACGGTCAAATTCCAGTCTGACTGTAAGCATTCAGATGGAGTCATACAATTGGATATCACCAGTCTTACGACCATCGCCCTTCTTGGTCTCGAAGCACTCTCGCTTGCCGACCAACCTGTGTCATATCTGACATCTTTACTGACACGGTTGTTTGTTGGtgagcagaaaaaagaaaacactagTGCTTCTCTCCGTGATGCAGTATTTGCAATCCCGGATGACTTTTTCGACCCAAAGTTTGACTTTGACTTCACGGACATGCGCGAGTCCGGATCTGATCCCGCGTGCACTCGCGGGGACGAGCCGTACAAGCGGCCCTACGGCTGGATGCGCTTCGCCCTGAAGGTCCGGGACAAGTATCCGGACGGGAACGGCTGGCTGGGACCGGACGGATGGAGGAGCCGTTCAGAGCCCGGGGAGTGGCCCGTCTCCTACCACGGGACAGGTCTGAAGGGGGCCGAGGGCATCGTGCAGACCCACTTCAGGGCTGGGGGAGGTCAGGCGTACGGGAGAGGCGTTTATTCATCTCCAGACATCAACATGGCAGAAATGTATGCTGAAGTGGGGAAATTCAAGTCGCAAAAGAACGGGAAGACTTATAGAGTCATCATGCAGAACAGAGTTAACCCTAAGAAGAGGGAAATCGTGGACAAAGACATCTGGTTGGTCCCTATACCGGAAGGGACATCTGCTgcgaaagagaaagaaatagtgGAGAGCTCAATCCGACCTTATGGCCTTCTGCTCAAAGAGGTGTAGGGAGGCCAACAGTAGGGCTCTAGCACATGATTTCCAAATGCTTAACATTATACACTCTGTGTTCAACATCATAtggaatgtatttaaaaaaaaaagcatataaaatgtttgttttgcacaTCATTAAGATGTCTATTTGTATCTCTGGAGATCAAGTGTTAGGCCTTGTGGTGTTATTTAAAAGCGGTGCAGTAAGTAATTTTTCTCCGAAAAGAGTTTTCTGGAAGTGATCTAAAGTGGCTTTCAACAGTTTATAGCCCCCCCAAAACAGgtgtaaaatgaacatttatcaAACGGAGTCTGAGTATTAACTAATGTGATCATTTCCCCCTTCACCTCCACCCGTGGTTTCACAGACCAGTCTAAGTCTtggactaaaatgtaaatctgagccgTTTCAACCGAGAGACACTTGCGACGTGTCTGGTCTTATATATTAGTGATTTCTTACAAGATGCTTTCATAGGAGGTAGAAAAACATGCTGcagatgcaataaaataaaaccaaataaatgtcTAAATCACTAGGCCCTGTA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU194700 lncRNA downstream 215804 9260334 ~ 9269148 (-) True G131852
TU194699 lncRNA downstream 216644 9260334 ~ 9268308 (-) False G131852
TU194701 lncRNA downstream 216644 9260334 ~ 9268308 (-) False G131852
TU194681 lncRNA downstream 267291 9141853 ~ 9217661 (-) True G131838
TU194665 lncRNA downstream 403847 9080850 ~ 9081105 (-) True G131827
TU194747 lncRNA upstream 1052 9492413 ~ 9494654 (-) True G131882
XR_006247031.1 lncRNA upstream 62182 9553543 ~ 9555368 (-) True LOC122323628
TU194766 lncRNA upstream 77709 9569070 ~ 9571386 (-) True G131896
TU194771 lncRNA upstream 99965 9591326 ~ 9591856 (-) True G131899
TU194777 lncRNA upstream 111760 9603121 ~ 9644847 (-) True G131903
XM_043216997.1 mRNA downstream 760 9479810 ~ 9484192 (-) True si:dkey-284p5.3
XM_043217758.1 mRNA downstream 15319 9458313 ~ 9469633 (-) True nt5c1aa
XM_043217181.1 mRNA downstream 50437 9120916 ~ 9434515 (-) True LOC122323377
XM_043217734.1 mRNA upstream 4261 9495622 ~ 9505038 (-) True laptm4b
XM_043217939.1 mRNA upstream 16128 9507489 ~ 9515018 (-) False mtdha
XM_043217938.1 mRNA upstream 16128 9507489 ~ 9515016 (-) False mtdha
XM_043217937.1 mRNA upstream 16128 9507489 ~ 9515016 (-) True mtdha
XM_043217359.1 mRNA upstream 25083 9516444 ~ 9521139 (-) True rrm2b
TU194713 other downstream 175600 9308720 ~ 9309352 (-) True G131861
XR_006247085.1 other downstream 727279 8751369 ~ 8757673 (-) False hey1
XR_006247069.1 other downstream 746166 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247071.1 other downstream 1164051 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 1164067 8287294 ~ 8320885 (-) False trit1
XR_006246990.1 other upstream 168534 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 816597 10307958 ~ 10311928 (-) False elp2
TU195129 other upstream 816597 10307958 ~ 10310675 (-) False elp2
TU195233 other upstream 1678909 11170270 ~ 11170913 (-) True G132219
TU195332 other upstream 2234962 11726323 ~ 11737482 (-) False LOC122323871

Expression Profile