Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043217072.1 |
| length | 1413 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 11 |
| gene id | sqleb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056717.1 |
| NCBI id | CM032086.1 |
| chromosome length | 20532727 |
| location | 18467978 ~ 18471674 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004506 | squalene monooxygenase activity | molecular_function |
| GO:0050660 | flavin adenine dinucleotide binding | molecular_function |
| id | description |
|---|---|
| K00511 | SQLE, ERG1; squalene monooxygenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU198531 | lncRNA | downstream | 7079 | 18457165 ~ 18460899 (-) | True | G134411 |
| TU198468 | lncRNA | downstream | 50125 | 18417026 ~ 18417853 (-) | True | G134365 |
| TU198411 | lncRNA | downstream | 164321 | 18290057 ~ 18303657 (-) | True | G134332 |
| TU198412 | lncRNA | downstream | 164321 | 18290057 ~ 18303657 (-) | False | G134332 |
| TU198410 | lncRNA | downstream | 164321 | 18292105 ~ 18303657 (-) | False | G134332 |
| XR_006247107.1 | lncRNA | upstream | 51526 | 18523200 ~ 18532017 (-) | False | LOC122324145 |
| XR_006247106.1 | lncRNA | upstream | 51526 | 18523200 ~ 18532017 (-) | True | LOC122324145 |
| XR_006247108.1 | lncRNA | upstream | 51526 | 18523200 ~ 18530637 (-) | False | LOC122324145 |
| TU198545 | lncRNA | upstream | 52023 | 18523697 ~ 18530621 (-) | False | LOC122324145 |
| TU198546 | lncRNA | upstream | 61499 | 18533173 ~ 18533500 (-) | True | G134426 |
| XM_043218453.1 | mRNA | downstream | 44286 | 18420659 ~ 18423692 (-) | False | naxe |
| XM_043218452.1 | mRNA | downstream | 44301 | 18420659 ~ 18423677 (-) | True | naxe |
| XM_043216995.1 | mRNA | downstream | 51675 | 18414224 ~ 18416303 (-) | True | sf3b4 |
| XM_043217393.1 | mRNA | downstream | 64232 | 18394006 ~ 18403746 (-) | True | mindy1 |
| XM_043217392.1 | mRNA | downstream | 64243 | 18394006 ~ 18403735 (-) | False | mindy1 |
| XM_043217029.1 | mRNA | upstream | 10980 | 18482654 ~ 18493910 (-) | True | recql4 |
| XM_043217085.1 | mRNA | upstream | 22426 | 18494100 ~ 18495558 (-) | True | limd1b |
| XM_043217766.1 | mRNA | upstream | 35021 | 18506695 ~ 18511505 (-) | True | clec3bb |
| XM_043217765.1 | mRNA | upstream | 39976 | 18511650 ~ 18514678 (-) | True | exosc7 |
| XM_043217829.1 | mRNA | upstream | 70482 | 18542156 ~ 18610956 (-) | True | bop1 |
| XR_006247044.1 | other | downstream | 279957 | 18184141 ~ 18188021 (-) | False | si:dkey-266f7.5 |
| XR_006247043.1 | other | downstream | 279958 | 18184141 ~ 18188020 (-) | False | si:dkey-266f7.5 |
| XR_006247042.1 | other | downstream | 279960 | 18184141 ~ 18188018 (-) | False | si:dkey-266f7.5 |
| TU198381 | other | downstream | 456579 | 18010882 ~ 18011399 (-) | True | G134318 |
| TU198368 | other | downstream | 532542 | 17929689 ~ 17935436 (-) | True | s100a10a |
| TU198770 | other | upstream | 404940 | 18876614 ~ 18933139 (-) | False | smim13 |
| TU198769 | other | upstream | 455847 | 18927521 ~ 18933139 (-) | False | smim13 |
| XR_006246998.1 | other | upstream | 1071108 | 19542782 ~ 19652807 (-) | False | khdrbs3 |
| XR_006246997.1 | other | upstream | 1071108 | 19542782 ~ 19652806 (-) | False | khdrbs3 |
| XR_006247087.1 | other | upstream | 1199113 | 19670787 ~ 19688386 (-) | False | LOC122324012 |
