RNA id: XM_043217092.1


Basic Information

Item Value
RNA id XM_043217092.1
length 6134
RNA type mRNA
GC content 0.40
exon number 3
gene id oprd1a
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 3003992 ~ 3022358 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTTAGttctctgctttttttctgtggcTGCTGCTGTCAAATATCTGTCCTCGCTGTCATAAATCCCATGGGGAGTTTCATTATATGTCGGGAATCCGAATAAAGCAGGTTGACGTAGCGAAGCTCTCCCTCACATAAGAAAGCGCAAGGTTGAGGCTCGGATCAGATCCCTTCAGAGAGCGGAGCGCTTCTCACACCTGTAGACAGAGACAAACTTTCGTTTTCCGTCTCTCACCCCGGCTGGACTCGAGCTCGTAACCCGCTTACGAGCCCTGCTCAAACCGAGCTCGTATTACAGCtacttctacattttttttctctctctcgcgtTCGAACCGTGAGGCGCAACTTTGGGCAGCGACGCTGAAGCGATGGAGCCGTCCGTCATCCCCGGCGCGGACATGTCCGACCTCTACTCCATGAACACGTTTAATGTCACTTTCCCCGACGAGGTGATGGGCTTCGTTCCCGACGGGAGGAACTACACCGAGCCTAACCCGGTAAAGAGCCCCGCGGGAATCATCATCGCCATTTCTATCACTGCTCTGTACTCCGTTATCTGCGTGGTGGGACTCTTAGGAAACATCCTAGTGATGTATGGAGTGGTCAGATACACAAAGCTGAAAACTGCCACCAATATCTACATCTTCAATTTGGCCCTTGCAGATGCTCTGGCTACTTCTACGCTTCCATTCCAGAGTGCCAAGTATCTAATGAACACCTGGCCTTTTGGTGAGATTCTGTGTAAAATCATCATAGCTATTGACTACTACAACATGTTTACCAGTATCTTCACCCTCACTATGATGAGTGTGGACCGTTACATTGCCGTGTGCCACCCTGTGAGAGCGCTGGAATTTCGTACCCCCATCAAGGCGAAAATAATCAATGTGTGCATCTGGATTCTCTCCTCTGCTGTTGGAGTGCCAATCATGATAATGGCCGTCACCAGAGGGACAAACCAAGGTGCCACTGTCTGCATGCTGAAGTTCCCTGATCCAGACTGGTACTGGGACACAGTAACAAAgatttgtgtgtttatctttGCATTTGTGGTACCGGTGCTAGTCATCACAATCTGCTATGGTCTGATGATCCTACGTTTGAGAAGTGTCCGTCTTCTCTCTGGCTCAAAGGAGAAGGACAGAAACATGCGTAGAATCACTCGAATGGTCTTGGTAGTGGTAGCCGCCTTCATTATCTGCTGGACACCTATCCATATCTTCATCATTGTCAAAACACTTGTAGACGTGAACCAAAAGAACCCCTTTGTGATTGCCAGCTGGCACCTGTGTATCGCACTCGGCTATACCAACAGCAGTCTCAATCCTGTCCTCTATGCTTTCTTGGATGAGAATTTCAAGAGATGCTTTAGAGACTTTTGCCCACCCTTTCGAACCAGAGCTGATCAGAATAGGCTTAACCGAGCAAGGAATGCCACAAGGGAGCCAGTGTCAGTCTGTGCACCTTCAGAGACAGGAAAAAAGCCAGTATGACTAGGCCTGGAGAGGATCCCACGGGGGTCCCAGTCCAGAAGAGTTCAACAGGACCTGCAATCTGAGGTGACTCAAATCTCCACTACTGAATTTTAGAAAAAAGAGCGGAAGAGCCACTTCTTAAATCTTGGAAAGCATACAGCTCCACCGTACTCAATACTGTCTCAGGTTTTGCTTATTCAGAAGATAACCAGAGAGACAGAGTTAAACAGCTCCTCATCATTCATTACTTTGTAATGTGGATTGACCCTGGTTTTCCTTCAGAAGAAACGCTAACACAACAATTAGCCTCTTCcgaaaacagtattaaaaacaGGGTTAATGACCAGACTTTCGATGTCCGGTGGATTTTCAGGGTCTGAAAATCCTGTCTGGTTTTGAGGACATAacccaaaaatctaaatgaagaAGCATTCATAGAAAGTCTGCAAACAATGGATGATTCAATTCCATGTGAGTGAAAATAGCTGCTGTTACAATCAAAAGCAAGATAGGCTACAAAAGCAAATAGTGAAGATGGGTTCCATTTGGAGGAAACTGGctcaaaattgaaaagtattttcagcagttgtttatatatttcatttcttcTATCTCTCAGATATTGGACTGGTAGAGGACAAGCATTGGGGAAATAGAAAAAACATGGGAAACAGATGTAAAAACTCTTCTCAAATGTCGCAAACACTGATGGATACTCCAGGGGAATTATGGGAAAATATGTCTTGCTCCAGAACTTGCTGTGAGGTTGGACAAAAGTGAAGAAAGGTGGTATGTTATGACATACAGATCAGAGAGTAAACGGTTTGAACCTGAGcctaatggaaaaataaatgatggaCTAATAAATATTGATGGATTATTAGCCATTATTGCTGAAGACCAGCTGACGACACCAAACTCTGCATTTACTGTGGCTTCCTCTCCAAATGACTCCATTACTACAGCCCCTGAACAAACTTTTTCTaatgttgccattttttgttCAATTACAGTGAAGAGGTGTACAGACAGATGTCTGAAATCCACCATTTCAGAACATTCCCAATAAGTTTACTTAAAGAGTGAAGAAAACCCCACTGAAGAAACACTAAATTACTATTGAGTGTTGGAACAATGGCACATTAAATGTGACATCGAATTGCATTTAATTGGCTTGAAATACGTGAAATATTGAATGTGTCCTGAAGCAAGGACAAAATTCACAAGAAGCTCTTCTCTGAAGTTCATGATATATAACTAGTTAACTGAGGGTCGGGAGCAAGGCCATGCCACGCCTCTATCAATCTTGTCCTAATCGTCTGgccaaaatatacaaatgaggTGATACCCCCACCCTGAGTCTCTCTGGGCCATCGATTCCAGACGCCCTAATCAACTTGTCCATCATTCTATCCCCCATACCTCATCATCCTCTTCTAACTCATCCCTAACATTCAGACcaataaactattatttatgtattcagtTGTGGCGTGGTCCTTGCTCGTGAagtatataaagagagagagctaaatattttatatgctgattttatgTGTATTAGTTGAATGTAACATTGCAGTTCTTCAATCGTACAATAATTTCTGAAcatgttgattttgatttgtaATGAATGCAGTTTGATTAGCTTTATATCTGATAttccaaacaaaaaagcaagtgtttatttttttatatacgcATATATATTACTGTGCTTTTACAGTCAAGTGTAGCAAAAACGGAatgtctgtatgttttattttttcattgtgtttggcagcttcattttctttcattccatttaaaatctcaagaaaaaattttttagtttaaagGTGTCATAGAATTGAAAAATGTCTCttggttacatacgtaacctaGAGACATTCCCCTTCAGGAACTCAAGCTTCGTTCCCCACAAGATCCCCACGCTACCAGAATTTCAACACTCTGTGTTTATGGGACCAGAGGCTACGAGTTGTGCCCCATCAGTGGCCACACCTACAGCTTCCGCAGCTCTGGGTGGGGGTGAAAGACTTGGCCAAGTCTATACCATGGGATGAAATAGAAAGCACCAGAGGGGACTCTCGAGTGGCAAAGAACCTGAGCCTAGCTCTTGGGTGAAACATCCATTCCCCGGGCCTTGGCCCCAAGACGTCTGCTCCCATATTGAGATAACCAGGGATGTGCACTGTTCTTAATGACAGGAGCTTcccctgggaccacacaaggatctggtgcagCAGCTTGCACAGACTTCCTTGGTGGTTGATATAAGAGACTACCAATGTGTTGTCTGAGAGGGTGGCAACTCATGACCGGTGAGAGTAGCGCATCTGACGTTAGCGTTACATGATGACATGGAACTCTTGGCAAGAGCCAAGGTTTCCTCCAGGCTGCAGGCCTGGAGGCTCAAGTGGGGCTTTTCTGAAGTTTCTGAATGGGAACTGTATTTACCTTGGCACAGTTGAATAATAACTGTACATGGAAATGACATGCAGGGAGTTCTAGGCCAGTCGACAACCGAACCAAAACCCCTGAATCATTAGAAGTTCTGCAGTTATTGTATAATTACCCAACCACATAACTGTGAGAGAaagtattgaaatatatattttcctccCTTTGTTTCCTCGCTACTGTGTGAGCTACTGAAAGGAGCCCACCGTGAAACAGCCAGTCAGTAGAGCTCAACACTGAGCTGCACTgtaaaacagccaatcagagcaaaactcaacattattattcatgaccATTCCACAAAAAGAAACCTAAGCCACATGCCCCCTATACCTTCTATGTAGATATCagagaacaattaaaaatgtcgTATCAATGCATTCTATGGCACCTTTAAAAGGTGGACTGAAGAATCCCCATAAGTGCTTGGTGAATTTTAATTGCAGTACATTTAAGTCAATTAACTGCATTGATTTTGGTCTATCTAAAAACAGCATAGGCCTACTAGATGCCTCATAACTCAAGAGTAAGTGTATTTGATGCCTTGCCTCTGGATATTTTCTAGATGTACTAGCTCACCGAgtcaattgttttattgttatgatGCTAACAAATGTACTGAGCTGTAATTTTGTTGATGATAAGTGATTTTAGTGACATTGTAtttgtgttgcatttttaaGAAAGGTATAAAAAGAAACTACAAGATCCCAGGTAAAAAACGTgtacacttccataatgtaaattttttgtacacaaattttgtacttaatatactgaaatgattctttagtacttcttaagtgCTAAAGATACTTAAACGTTTACACAAGAAGGATACTAAATACTTAAGTACTTaagtatttagttaccacttgtagcacacttAAAAGCATCTTTCATACAATAGTACActcaagtgtgctacaagtcgtaactaaatacatttttgaaaacaaaggtagtatgttaaaagtgcattttagttcatattcacgGCGTCTCAAAAcagcacagttgagtacacttagatgatcttaactttatcttaagaagtactaaagaatcatgtttaatatattaagtacaaaactAGTGCACAAAAATAGAGctctttaattacattatggaagtgtacttgtttttttaacctGGGACAGTAAGCACCTACAGAAACATAATCTGATTTGTTGATGGGCAAAATATATATGGGTTTGTTTAGGCATCAGTTTGTGGGTCCAAGGTTAACAGACATTAACAGTTTTTGTTCTAcaacatatatttttcatacatttgtCATAATTCCTAAAAAAAGGTTCTCAATTCCAATATCCATGCTCTATGAactgagcaaaaaataaaagcatgctggttaggtatgttttgatgCATGGCtgttggtttaagctggtcatgAGGTAGTTTAAGCTGTTCAAGTGTGAGCAGCTGagaaccagcttaaaccagcagcCATTTTTTCAAAACGCATccaaccagcatatgctgttttttaaaatgtatttattaatattattttgttagttttaccTTTATAAAGAATTTAGAGACTGGAATTGAGAGCTGCTTTTATGAAACTGTGTGTGCTAAAGGGACAGCTTAACCAAAAATGaagaattctgtcatcatttactctccctcatgtTGCTGAACacgtattttaaagaatgtgtttAGCAAACATTCTCACAATATTATATAGAAGTCATTTAAAAGCATACTTCAACATATGTTATCAtattcagcagaagaaagagacTCATAGAGGTATGCAGggtcagtaaatatatatttatattttggggtgaactatctctttaaaaacacaagtatgcatcaaaatgtaatacaattttttttttcttggactACAAACTGAACTGTTCTATACACTCACCATACAACCCATGAGGACTGCATGTTCTGTATTAAAAAAGTTATGAATGGGTACTGTATTTGAAATAATGGTGCATACCTGCCAGTTAGCGGAATATTCAGTCTAATTTCTGGATTAGTTACATCTTTGATGAAAAGCTTCTTTTTTGTGGAGTGATCTGCACAGTCATTTAgactttttgttattattataatttattattgagTCTGATTCCTGTTATCTTTGCTGGTTGTTAATACTTGGCACAactgatataataaatataatagaataaaGCA

Function

GO:

id name namespace
GO:0038003 opioid receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0038046 enkephalin receptor activity molecular_function

KEGG:

id description
K04213 OPRD1; delta-type opioid receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU192018 lncRNA downstream 29755 2973017 ~ 2974237 (-) True G130060
XR_006247100.1 lncRNA downstream 68335 2916462 ~ 2935657 (-) False LOC122324069
XR_006247099.1 lncRNA downstream 68335 2929395 ~ 2935657 (-) True LOC122324069
TU192003 lncRNA downstream 75443 2928114 ~ 2928549 (-) True G130052
TU192000 lncRNA downstream 79606 2924009 ~ 2924386 (-) True G130049
TU192042 lncRNA upstream 68418 3090776 ~ 3091407 (-) True G130076
TU192044 lncRNA upstream 70713 3093071 ~ 3093703 (-) True G130078
TU192046 lncRNA upstream 80595 3102953 ~ 3103362 (-) True G130080
TU192105 lncRNA upstream 291046 3313404 ~ 3314132 (-) False LOC122323345
TU192102 lncRNA upstream 344973 3367331 ~ 3370561 (-) False zdhhc18b
XM_043217009.1 mRNA downstream 119341 2876924 ~ 2884651 (-) True maneal
XM_043217207.1 mRNA downstream 252459 2742586 ~ 2751533 (-) False LOC122323398
XM_043217017.1 mRNA downstream 267862 2733736 ~ 2736130 (-) True stmn1a
XM_043217738.1 mRNA downstream 745558 2253838 ~ 2258434 (-) True cited4a
XM_043218164.1 mRNA downstream 942267 2060114 ~ 2061725 (-) True LOC122324005
XM_043217090.1 mRNA upstream 291031 3313389 ~ 3323828 (-) True LOC122323345
XM_043218439.1 mRNA upstream 341123 3363481 ~ 3379927 (-) True zdhhc18b
XM_043218438.1 mRNA upstream 341123 3363481 ~ 3379923 (-) False zdhhc18b
XM_043218437.1 mRNA upstream 341123 3363481 ~ 3379922 (-) False zdhhc18b
XM_043218436.1 mRNA upstream 361379 3383737 ~ 3437997 (-) False arid1ab
TU191990 other downstream 92389 2908489 ~ 2911603 (-) True G130041
TU191925 other downstream 171036 2825344 ~ 2832956 (-) True G130000
TU191907 other downstream 252422 2740004 ~ 2751570 (-) True LOC122323398
XR_006247129.1 other downstream 684619 2319236 ~ 2319373 (-) True LOC122324259
XR_006247128.1 other downstream 684944 2318972 ~ 2319048 (-) True LOC122324258
TU192049 other upstream 126796 3149154 ~ 3149789 (-) True G130083
TU192945 other upstream 1785739 4808097 ~ 4941832 (-) True G130696
TU193036 other upstream 2064886 5087244 ~ 5104353 (-) False LOC122323502
TU193037 other upstream 2064886 5087244 ~ 5222883 (-) True LOC122323502
TU193035 other upstream 2078463 5100821 ~ 5104353 (-) False LOC122323502

Expression Profile