RNA id: XM_043217358.1


Basic Information

Item Value
RNA id XM_043217358.1
length 2803
RNA type mRNA
GC content 0.46
exon number 12
gene id azin1b
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 9521341 ~ 9527987 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGAGCAGCAGCGACCATTTCTTCCTGAGACAGACAGCAGCGCTCTCGTGTTCCGCCGAGCTACCTTCGCCCAGGCATATGGCACATACGGCCCCTCTTCTTTCTTCTATTTGTGTCCCCACTACTCTTTAAAAATTCCGCCGAAAAAGAGAAGACGATTTTCCAAATCATTCAGGCCGTTATCTCACGGCTCCCCACTCTCTCTGCGAGTGTATAAGCGCTACCCAGAAGGCCTAGGGGAGGCCCTCTACCGCGAGCAGTTTGACTTCAACGCTGAGCCGCCTTGGGATCCTAGTTGATAGCGGGAGAGGACCATCTCCCACGTTGTCCATTTTGTTGCATACCCAGAATACCCCAGCGGCTCAGTAAACTCTCTATGATTGTCGGATTTGCGGAATACGGTTGAGATGAAAGGATTTGTTGATGCACCAAACTACTTCATTGAACTACTTGAGGGAGGAACGACCCTTGACAGCGTCATCGACAACCATGTCTATGAGCAAAATCTGGCTGAAAAGAATGCATTTGTTGTGGCCGACCTTGGGGCCCTAATGCGACAGCATGTTCTGTGGAAGACCACTATGCCTCTTGTTCGACCCTTCTACCCAGTCAGCTGTAACAGCAGCCCTGTAGTCATTGAAGTCCTGTCTGCTCTTGGCGTTGGTTTTGTCTGTGCAAAtaagGCTGAAACCACATTGGTACTCAATCACGATGTCCCTCCTGAGAACATCATCCTGTCTGGAGTTTGCAAGCAGCTTTCGCTCATTAAACACGCGGCCAAGGCCGGCATTAACTATTTGGTGTGTGAAAATGAGGCAGAGCTTCGCAAAATTGCCCGTGCCCATCCTGAGGCCAAGCTTTTGCTTCAAGTGTGCACTGACGCACAGGTTGAGGAAGCAAGCGTGACCATTGGTTGCTCCCTGAAGAGCTGTAGACACCTTCTGGAAATGGCCAAAGAGTTGAGTGTGAATGTGGTTGGAGTCACGTTCCAGGTACCAGCCTCCTGCCGAGATCCCCAAGCATACACCCACGCGCTATCAGACTCCCGCTGCGTCTTTGACATGGCTAAGGAACTAGGCTTTGACATGAAGATCCTGGATATTGGCGGAGGATTCAGCGGTTCTGAGTTCCAGTTGAAACAGGTCAATTCAGTCGTCAGACCCCTGCTGGAAGCCTATTTCCCCTCAGTGTCTGGAGTGAGTGTCATCGCTGAACCGGGaaatttctttgtgttttccTCCTTCACTCTGGCCGTTAATGTTATTGGCAAAAAAGCAGTATACCGGGATCTCCATAGCAGCGCTCATGATGAGCTGACCCCAAACGATGCACCAGAATTTGTGTATTACATGAACGATGGTGTCTATGGATCTTTCATGGGGAAGTTGTTTGGAAATCTCATCACCACACCATCTGTCCACAAGctgTCGCTCACCCTAGACGAGCCTGTGTTTTCCAGCAGCCTGTGGGGTCCATCGTGTGACCCTCTGGACCAGGTGGTGGAGCACTGCCTGCTCCCCGAGCTCGCGGTCGGGGACTGGCTCATTTTCAACAACATGGGGGCCAGCGGTCAGGAGGGTCCGGCAACCCTCAGCGACACAGACCAACCACCTGTGTATTACACCATCTCCACAGATGACTGGTTTGAGATGCAGGAGGCTGGAATTTCTCTCGACGACACCATGAAAAACCTCTCGTTGGTCCAGTATGGCTTGTAAAAGAGCCAAGCTCCGTCCACTAACCACTGGGCATGTGAATAGCTTGCAGAGTCAACATTCCAACGGTCATGGGTGGAAAATTATATTGGTTTTggtgggggagaaaaaaaaatgacttggtCGGCAGAAACTAATTGATTGACTTCGTTACCTCAGTTTCTCACAATTACAAAAGGCTCTATTTCCTTATCGCTCAAAAAGAATGACAAAACCCATATGAAATAACATATGCAACAAAATGGATAACTGTGGAGATGGCACCCAAAGCTTGGGTTTCTTAATCAAACACCgtttacataaatgttaaactaatttaattttattatgtatacatatatagatatagatgaCCTACTGACAGTCTTGTAAACGAGTTGTCCGTACAAGATGCATTTGTCTCAAATCAGGATAGATTTTAGATTCAGCACAAGTAGTGCGTGAACAAGTGAAAAATTGGTTTAGCAATTCTGTCCTTGTTCTCTCGTTCTCGCTGTCCTTGGGTTTTATAGGAGTAGGGAGCTTCTCTGTGCTCCTCATGCCAAATTATGGTTTCCTCATTACATGTGGTGCGTCACGTGACAGTATTTTCCAAAGGTTGTTATATTTCATAGTGCTCTATGGTTGAGTGTGCTGTAATTTGCAGTGTCCCTTCAAAAGATTTTGAGCATTCTGCCAGGTTTTCGATTGAAAGTTTATCCAACTCGGTCTCCTGTTTTCTCTAACGGTGTGCTTTATACAACTAGAAAGACTGCCCCGGTGTTACGAAGCTGCTGACGGCGTGCTTAGAGATCACATTTACCTCAAGTAACaccaaaaggaaaacaaaacgCAGTCTGATTAAATGCTGCAAAGCGCTAGTTCTCAAACTAAAATCACAACTTCAAATGTTGTACATTTCGAATTCATGTTATACCTCTTGTGTGTCCAGCATGGTGTCTGAATTTGGTTATAACAGCTCACTGTTTTATAAAAACCACACCTTAGAAATGAAATATACCTTTTGTCTAAGTCCACTAATGGACCATTGCCTGTTTTTGACTGTAAAATTGTGCttgtaaaagtaattaaaatattaatttaataca

Function

GO:

id name namespace
GO:0006596 polyamine biosynthetic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU194747 lncRNA downstream 26687 9492413 ~ 9494654 (-) True G131882
TU194700 lncRNA downstream 252193 9260334 ~ 9269148 (-) True G131852
TU194699 lncRNA downstream 253033 9260334 ~ 9268308 (-) False G131852
TU194701 lncRNA downstream 253033 9260334 ~ 9268308 (-) False G131852
TU194681 lncRNA downstream 303680 9141853 ~ 9217661 (-) True G131838
XR_006247031.1 lncRNA upstream 25556 9553543 ~ 9555368 (-) True LOC122323628
TU194766 lncRNA upstream 41083 9569070 ~ 9571386 (-) True G131896
TU194771 lncRNA upstream 63339 9591326 ~ 9591856 (-) True G131899
TU194777 lncRNA upstream 75134 9603121 ~ 9644847 (-) True G131903
TU194794 lncRNA upstream 119562 9647549 ~ 9648024 (-) True G131910
XM_043217359.1 mRNA downstream 202 9516444 ~ 9521139 (-) True rrm2b
XM_043217939.1 mRNA downstream 6323 9507489 ~ 9515018 (-) False mtdha
XM_043217938.1 mRNA downstream 6325 9507489 ~ 9515016 (-) False mtdha
XM_043217937.1 mRNA downstream 6325 9507489 ~ 9515016 (-) True mtdha
XM_043217734.1 mRNA downstream 16303 9495622 ~ 9505038 (-) True laptm4b
XM_043217086.1 mRNA upstream 51588 9579575 ~ 9584771 (-) True klhl38a
XM_043217087.1 mRNA upstream 52568 9580555 ~ 9584773 (-) False klhl38a
XM_043217982.1 mRNA upstream 103254 9631241 ~ 9638982 (-) True trib1
XM_043217018.1 mRNA upstream 131369 9659356 ~ 9664456 (-) False cibar1
XM_043218288.1 mRNA upstream 381117 9909104 ~ 9911742 (-) True lrrc69
TU194713 other downstream 211989 9308720 ~ 9309352 (-) True G131861
XR_006247085.1 other downstream 763668 8751369 ~ 8757673 (-) False hey1
XR_006247069.1 other downstream 782555 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247071.1 other downstream 1200440 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 1200456 8287294 ~ 8320885 (-) False trit1
XR_006246990.1 other upstream 131908 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 779971 10307958 ~ 10311928 (-) False elp2
TU195129 other upstream 779971 10307958 ~ 10310675 (-) False elp2
TU195233 other upstream 1642283 11170270 ~ 11170913 (-) True G132219
TU195332 other upstream 2198336 11726323 ~ 11737482 (-) False LOC122323871

Expression Profile