RNA id: XM_043217748.1


Basic Information

Item Value
RNA id XM_043217748.1
length 1634
RNA type mRNA
GC content 0.49
exon number 6
gene id LOC122323699
representative False

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 4821737 ~ 4827915 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGTTAGCACCATTTTGTGATGAATGAGGGGAGGGGAGGCAGATAGGGTTGCGGATTAGAAGTAGATCGGCGTTAACCGGACAGTTTCGTGggatatagttttgtttttaaagttcttaaatatatttagaagaggGGCGGTAGTTGTACAATTTCCGGGCGTCAAGTAGAGAAGTTTGGAGCGTGATTTTGTCGAGTCCGTGCTCCGGCGACCCGCTAAGCTACACAGCTAACAGACCTGCCCTGACTACTGCACGAGCGTTTCAGAGAAAAGGAGAGATCCCTGCGAGTCTGAAGAAACATGAGTGCCCCTTCTTCTCAAAAAGTCGTCCTGAAAAGCACCACCAAGGTGTCCCTGAATGAGCGCTTCACAAACATGCTGAAGAACAAGCAGCCGACAGTGAGTAGCATCCGGGCGACcatgcagcagcagcacatgGCCAGTGCGAGGAACCGCCGGCTCGCTCAGCAGATGGAGAACAGGCCCTCTGTGCAGGCTGCCCTGCAACACAAACAGAGCCTAAAACAGCGACTTGGGAAGAGCAACATCCAGGCCAGGCTGGGTCGACCCATCGGGGCGCTGATGCCGGGAGGCGGCAGAGGACGGGGATTTCCTGGAGGATTACGTGGAGCTGGACGAGGACTGCGGGGAAGAGCCAGAGGTGGCGGCATGAGAGGAGCACTCACTCTTAGAGGTGCAGGTCAGATGAGAGGTAGGGGAGGTCCTGGACGTAACGGTCTCCGTCGAGGCATGCGTCATCGTGGAGGAGCTCCAGGACGAGGAGCTTTGGGAGGCCGAGGAGCAGCACGCGGAGCACCTGGAGGAAGAGGCCGCGGGGGTCTGAGAGGTCGTGGAGGGTTTGCAGGAAGGGGTCGTGGACGCGGCAGAGGCCGGGGAGCGGGCCGTCCCTCCGTCACAAGAGAGCAGTTGGACAACCAGCTCGATGCGTACATGTCCAAGACCAAGGGCCACCTGGACGCCGAGCTGGACGCGTACATGGCCCAGGCGGACCCTGAGAGCATGGAGTGACCACAGCCGAGACGGCAGCTCCCCAAAGATCTGCAGATAATAGACTGATTGACAAGATACGCGTGTCCAGTACCATTAAAGCTGTTGCTCTTTGGACGCTCCCGgagaagacattttaaacttgaAGGCTGTACAAAGTTATGTATCATCACCCCCTTTATCTTCAAAGATTTGCTAATCGCCACTCGTGTTTTCTAAACTGAACTCCGTATCATCAGGAAATCCTCACCACACTTTTAAAAGTCAGTGAGGTGAAGGAACGAAAATCTTGTTTTCAATCGAGCTATATTAATAGATTGTTTAATGGggttttttggttgttgttttttttaagttcagtaAATGGCAACAATGTTTGAGGAACCGTGAACTCCCAAGTACGTTTGATCATCCGCTGTTAAAATGTGGTTTATATAGATGAACAGATGTTAATTACCGTAATGTTCTACAAATGAAACTTacctttttattaatgtatttttattgttttaaagtagaACTTTTATTCAGTATACGCAATCttgatatcttttttttttctttctttttttgtcaaaagatgttttaaaaatataatgtaacccacaattttttttttttttttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU192926 lncRNA downstream 77182 4738805 ~ 4744555 (-) True G130690
TU192692 lncRNA downstream 280146 4540269 ~ 4541591 (-) False polr2k
TU192630 lncRNA downstream 330250 4490260 ~ 4491487 (-) True G130476
TU192638 lncRNA downstream 337341 4469759 ~ 4484396 (-) True G130482
TU192654 lncRNA downstream 413343 4408194 ~ 4408394 (-) True G130494
TU192985 lncRNA upstream 2110 4830024 ~ 4964829 (-) True G130713
TU192992 lncRNA upstream 21235 4849149 ~ 4986966 (-) True G130716
TU192993 lncRNA upstream 22678 4850592 ~ 4989763 (-) False G130717
TU192996 lncRNA upstream 22678 4850592 ~ 4989763 (-) True G130717
TU192966 lncRNA upstream 45820 4873734 ~ 5013690 (-) True G130710
XM_043217137.1 mRNA downstream 1710 4809114 ~ 4820027 (-) False LOC122323359
XM_043217138.1 mRNA downstream 1846 4809114 ~ 4819891 (-) True LOC122323359
XM_043217841.1 mRNA downstream 86077 4707322 ~ 4735660 (-) True LOC122323748
XM_043217842.1 mRNA downstream 86078 4707322 ~ 4735659 (-) False LOC122323748
XM_043217588.1 mRNA downstream 240816 4573448 ~ 4580921 (-) True adck5
XM_043217362.1 mRNA upstream 224412 5052326 ~ 5060357 (-) False LOC122323496
XM_043217361.1 mRNA upstream 228146 5056060 ~ 5060357 (-) True LOC122323496
XM_043217363.1 mRNA upstream 235251 5063165 ~ 5065170 (-) True LOC122323497
XM_043217364.1 mRNA upstream 248800 5076714 ~ 5078874 (-) True LOC122323498
XM_043217365.1 mRNA upstream 255979 5083893 ~ 5089261 (-) True LOC122323501
TU192049 other downstream 1671948 3149154 ~ 3149789 (-) True G130083
TU191990 other downstream 1910134 2908489 ~ 2911603 (-) True G130041
TU191925 other downstream 1988781 2825344 ~ 2832956 (-) True G130000
TU191907 other downstream 2070167 2740004 ~ 2751570 (-) True LOC122323398
XR_006247129.1 other downstream 2502364 2319236 ~ 2319373 (-) True LOC122324259
TU193036 other upstream 259330 5087244 ~ 5104353 (-) False LOC122323502
TU193037 other upstream 259330 5087244 ~ 5222883 (-) True LOC122323502
TU193035 other upstream 272907 5100821 ~ 5104353 (-) False LOC122323502
TU193048 other upstream 313591 5141505 ~ 5158002 (-) True G130744
TU193049 other upstream 313591 5141505 ~ 5260164 (-) False G130744

Expression Profile