RNA id: XM_043217942.1


Basic Information

Item Value
RNA id XM_043217942.1
length 4973
RNA type mRNA
GC content 0.46
exon number 22
gene id myo1g
representative False

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 5360053 ~ 5397563 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTTTCATGGCCTGTGGTAGCTCAGCAAGACATGAAGTGCTCTCATGTTTAAAGATAGTTCCCTCTACAGAAATACGCACATACATATGCGCTAGGTTCTCTTGAACAGGATGACATGCTGGAGCCTGCAGACCGCAGTCATCACCGAGTTCACTCTTCACAGCCTCAGATCATGCAACTACCAAGAAGTAGGCCACACCCACTCTACATTCGCCTCTTCCGCCGGCTTCGAGAGGAAGGCAGTCAGCGCTAGGGTCCTGCGTCTATCTCGTCACCTTCCACTTTTCTCTCCATCCATTCGGCCTTCATATAGACTCCTGCAAGGATGGCAGAGCTGGAGGGCTTGGAGTTCGGAAAGTCAGACTTTGTGCTTCTAGACGAGGTGACCATGGAGCAGTTTATGGAGAACTTGAAGTTAAGGTTTGAGAAAGGCCGTATTTACACTTTCATTGGAGAAGTAGTGGTGTCAGTCAATCCGTACAAACATTTGGATATCTATGGGAAGGAGGTTATTGAGAACTACAGGGGAAGAGAACTGTATGAGAATCCACCTCACCTGTACGCTGTCGCAGACGCTGCTTACAAAGCCATGAAGAGACGAGCCAAAGACACATGCATCGTCATTTCAGGTGAGAGCGGAGCAGGCAAGACTGAGGCAAGCAAATATATTATGCAGTACATTGCAGCCATCACCAACCCTAGCCAGAGGGCAGAGGTCGAGAGCGTGAAGAAGGTGCTCCTCAAGTCCAACTGTGTGTTAGAGGCATTTGGGAATGCTAAGACCAACCGCAATGATAACTCCAGCCGCTTCGGCAAATACATGGACATCAACTTCAACTTCAACGGAGACCCCACGGGAGGACACATCAACAACTACCTGCTGGAGAAGTCTAGAGTTGTCAATCAgcaggagggagagagaaattTCCACTCATTTTATCAGGTGTTACGGGGAGGATCTGATGAATTGCTGAAGTCTTTGTATCTGCAGAGAGATCCCGCAGAATACGCCTACACCACTCAAGGAGCCTCTGTCACACTTGCGTCCAATAATGACTCCTTATGTCACAAAGCTGTGATGGCAGCACTGAAAGTGATTGGCTTCACCGGTGAAGAGATCGCCTCCATCTACAAGATCCTCAGTACCATCCTACACCTGGGTAACCTTCAGTTTACTAGTGATGGTGAGCATGTCCTACTTGTGGGTGACGATACAGTGAAGCACATTTCTGAGCTGACGTCCACAGAGCCTGAGAATACCAGAAAAGCACTGCTGTACCGCACAGTGGCTACTGGGGGTGGAGAGGTCATAGAAAAGGGACACAACGAGCAGGAAGCTAGCTATGGAAGAGATGCTTTTGCCAAGGCTTTATATGAGAGGTTATTTGCGTGGATAGTGGGTCGTATCAATGACGTGATTGAAGTGAAAGACTATAATCCTGCTCTGCATGGCAAAAACACTGTTATAGGTGTGCTGGACATCTATGGCTTTGAGATCTTTGATAACAACAGCTTTGAGCAGTTTTGCATCAACTACTGCAACGAGAAGCTGCAGCAGCTCTTCATTGAGCTTATTCTGCGGCAGGAGCAGGACGAGTACCAGAGAGAGGGTATCACGTGGCAGCACATCGAATACTTTAACAATCAGATCATAGTGGATTTAGTGGAGCAGCCTCATAAAGGCATCATCTCCATCCTGGATGAAGCCTGTCTCATTGCAGGGAAAGTCACAGATACTGTCTGCCTGGACAGCATGAACAAAAAGCTGGGCCAGCACCCTCACTACACCTCCCGGAAACTCTGTCCCGCCGACAAGACCATGGAGTTCAATCGAGATTTTCGTATCCGACACTACGCGGGAGACGTTACGTACTCAGTTGAGGGCTTTCTTGATAAGAACAAGGACCCGCTTTTCCAGGATTTCAAGCGACTGATGTACAACAGTTCTGACCCTGTGCTCAAAGAAATGTGGCCCGATGGGAAAATGAGTATCACAGAGGTGACCAAACGACCTCTAACTGCAGCCACACTCTTCAAAAACTCTATTATTGCTCTAGTGGACAAACTGGCCTGTAAGGAGCCGTACTACGTGCGGTGCATAAAGCCAAATGAGGTGAAGTCCCCCCTGCTGTTTGATGACGGTCGCTGCCAGCATCAAGTGGCGTACCTGGGACTGCTGGAGAATGTGCGCGTGCGTCGAGCTGGGTTTGCCTACAGACAGCCGTATGCTCGCTTTCTGCAGAGGTACAAGATGACCTGTGAATACACGTGGCCTAATCACCTGATGAGCTCTGACCAGGAGGCTGTGGAGGCCATCGTGAACCAGCACGGCTTTGAGGACGACGTCGCGTACGGCCACACCAAGCTCTTCGTGAGAACACCTCGCACACTCTTCACGCTGGAGCAAGAGAGAGCCGCGCTCATCCCCATACTAGTGCTCTTCTTACAGAAGGTTTGGAGAGGTGCATTAGCACGTATGCGATGTAGGAAAATAAGGGCTATATATACCATAATGGCGTATTATAAATGCTACAAGGTGAAGGCTCACTTCTGGGAAGTGGAGAGACGGTTCGCTAACGTCCGAAACATGGCCGACTACGGGAAGAGTGTGGAGTGGCCCTCACCGCCTGCAGCCCTGGTGCAGTTCCACAGAATCACACAGCACCTCTACCGCCGATGGTGGGCCCggcagctgattaaaaacatcccCCCGTCGGACATGGCGGAGGTGAGGGCTAAAGTAGCTGCTCTGTCAGCTCTGAGCGGGGAGAGAGTGGACTGGGGCTACAGCCGCGCCTGGGAGAGAGACTATTTGGCCAATGCAAAAGACTCTCCTCTGACGAACACCAACTTTGTGCGCATCACTAAGGAGCTGAAGAACAAAGACCAGTACAGCCAGGTCCTCTTTTCGTGCTCCGTCAGGATGCTCAACTGGTTCAACAACACAAAGGACAGAGCTCTGCTCATCACAGACAAGCATATCTACAGACTGGAGcccaaaaaacactttaaagtgCAAAAACGAATATCACTTGATTCGGTGGTCGGTGTGAGCGTAACAAGCGGCAGTGACCAGATGGTGGCGCTACATACTGCCTCTCAGGATGACTTCCTAGTGCACCTACAGAGGGGTCAGCTCAACCCAAATCAGGACCGTGTAGGGGAGTTGGTGGGAAGCCTCAAAGACCACTTCACGCGAGTGAAGAACGCTCGACTGTCGGTCAAAGTGTGCCCCACGGCGCTCCAGGTACACATGAGCGGAAAACCCAAGAGTGTCACCGTCGAGAGCAAGCCCGGCCAGACCGTCGCAGACTTCAAGAAGAGTCGAACAGGATTCACCTTACTGCTGCCCCATCAGTAAAGCCAATGCTCAGGGCACAAAACAGTCACAGATGGGACCATAGTTTCCAGAGATTTCTTTTCACACAGGGCTGGATAGGTCTTACACTCCGTAGTCTTAAACAGAAGTAACCAGTTATCGTTAGTGAGCTTTAAATGAAGATACGCGGCATAAATGATTATGCTGATCCGCTGTTGTTCTCCCGGCCCTcctctgtttttcattttgcacaCAGCCGATGCGCTGTGTCATGTCTTTTGAACTGTGGGGGATCACgtaatgctattttattatttatgagaGAATGTTCTATTGATATGGCCTTTGCACTTTTCACAACACATATAGAGtctatttttatgttctttatgAGTGTACATTTTTGTGGAGATGTAACCAAGAGTATTTTCATGTGTTTGtgcaggtatttttttttaaaaaggatactaatgtgtacttttaaatatgtactAATATGTATGTAAAGTTGTACCACCCAAGTGAAaactttgtaccttttttctgagagtACAGGACTATTTAACCGAGATTTACAACACCTTGGGTTACACCTAACAATATTGATAATGCTCTTtagtaatataaaaacagaGGAGCGattttaattcttattaatatCTGTCAAAAGtggtatttaaaaacagcaaaactgtAATCAAATCATATGTGGGCAATatgatattgttttattaaatgctacATGCAGTAATTGTGTGGTTGTTGTATATACTGTACGGTTTATGAAGACACAATTGTGTAAATGAGTTTTGGTATTAAAGTGGCCTCATAAACCAAATTGCTTAAAACATACTATCTGAAATTTCACAAGGTTTCTGTCAAAGATTTGTTTAAGGTTAGAGGATAGAAAATGAGATTAGGAGGGTATAATGCCTATAGAGAGCCTTttaaaccgtgtgtgtgtgctgatttTTCTGGTTTAAGAcaggtattacaatttgaagatggtttatgaggacacccatactaaacatactaaatggtgtttgttgttgttgttttttaatctaaaaaagcATAGTTTCCGGTAAggagtaggtttaggtgtagggcaatagcacatacagtttgtacaatataaaaaccattacgtcCTCATAAACCATAAATAccaacacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaagattcTCAGTAGTGACAGGTTGCCTTACTGTCACTCTGTTTTCTATTTCCTGCTTCCACTCGCCTGCTGTGAGCATCTTTCATCTATTCTGACACccctgtgttttcattttttgtgtgtctgtgatttGACTATTTTTTGACGCTTCTTTGCACGCACCTGTCTGTCTGCTGACACTGAACTCTGTTTCTGTCTCAATGTGTCATGAGCATCATTGGTTATTGAATATCtaagaatgtattttttcacaCCTTTACTCTGTTTGTCAGTTTACTTTTGGTCATTCGACATGAAACGTCAAGCAATGACATTCTGTTCCCCatcaaaaatgatttcagaCGACAGTGTACGTGTATACTTAGTATACATGCAATTAGGACTTTATATTAGTGTAGGAGATTGTCTGAAATaattgcactttaa

Function

GO:

id name namespace
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU193085 lncRNA downstream 6791 5345595 ~ 5353262 (-) True G130764
TU193089 lncRNA downstream 85132 5271840 ~ 5274921 (-) True G130768
XR_006246983.1 lncRNA downstream 119972 5237309 ~ 5240081 (-) False LOC122323253
XR_006246982.1 lncRNA downstream 119972 5237309 ~ 5240081 (-) True LOC122323253
TU193039 lncRNA downstream 137170 5220812 ~ 5222883 (-) False LOC122323502
TU193116 lncRNA upstream 6959 5404516 ~ 5405636 (-) True LOC122324254
TU193130 lncRNA upstream 36005 5433562 ~ 5433929 (-) True G130801
TU193134 lncRNA upstream 42869 5440426 ~ 5440865 (-) True G130804
TU193178 lncRNA upstream 123382 5520939 ~ 5522620 (-) False G130827
TU193179 lncRNA upstream 123382 5520939 ~ 5522966 (-) True G130827
XM_043217632.1 mRNA downstream 45888 5310748 ~ 5314165 (-) True txnipa
XM_043217341.1 mRNA downstream 72892 5281443 ~ 5287161 (-) True si:dkeyp-92c9.4
XM_043217352.1 mRNA downstream 123521 5233781 ~ 5236532 (-) True LOC122323489
XM_043217353.1 mRNA downstream 123524 5233783 ~ 5236529 (-) False LOC122323489
XM_043218450.1 mRNA downstream 191026 5167642 ~ 5169027 (-) True LOC122324190
XM_043218366.1 mRNA upstream 717 5398274 ~ 5403131 (-) True si:dkey-154b15.1
XM_043217326.1 mRNA upstream 103708 5501265 ~ 5504405 (-) True LOC122323473
XM_043217325.1 mRNA upstream 108495 5506052 ~ 5510656 (-) True LOC122323472
XM_043217324.1 mRNA upstream 117470 5515027 ~ 5519834 (-) True LOC122323471
XM_043217058.1 mRNA upstream 125523 5523080 ~ 5527170 (-) True xkr8.3
TU193049 other downstream 99889 5141505 ~ 5260164 (-) False G130744
TU193082 other downstream 107864 5245353 ~ 5252189 (-) True G130763
TU193037 other downstream 137170 5087244 ~ 5222883 (-) True LOC122323502
TU193048 other downstream 202051 5141505 ~ 5158002 (-) True G130744
TU193036 other downstream 255700 5087244 ~ 5104353 (-) False LOC122323502
XR_006247125.1 other upstream 7212 5404769 ~ 5404900 (-) True LOC122324255
XR_006247124.1 other upstream 7529 5405086 ~ 5405218 (-) False LOC122324254
TU193406 other upstream 964790 6362347 ~ 6363172 (-) True G131006
TU193577 other upstream 1233632 6631189 ~ 6639220 (-) False sh3bp5lb
TU193649 other upstream 1250881 6648438 ~ 6649389 (-) True polr1h

Expression Profile