RNA id: XM_043218138.1


Basic Information

Item Value
RNA id XM_043218138.1
length 5137
RNA type mRNA
GC content 0.45
exon number 4
gene id zbtb10
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8788213 ~ 8805478 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCCGAGCATCGTGCCTCGCGCGACAAACATGGAGCGACGTCTGTAATGACACGCGCAGGGGAGGCGTGAAAGGGATACAAGGACTTATTGGTTCGAGACGTGTACTTCTATAGAAGAAAAAGCATGCGGAAAATGGGTGCAGTCATCGACACAAAAGACCCCTGGCTGTTTGCCGTCACCCCCATCTTCCTTTAACTGGAGccccccctcctcctccctcgGACCGAGATGCATTGTGGGGGAAGTCGTTGCCATTCGACCTCTGCGGGGCCTGCGCGGACGCAGACAGAACCCTCAAATTCATTATGCCTTTAAAAACCCTATTTATTTCCGCATAACCTACATACTCGCACCAGGAGGCCGGAGCGCGGAAAAAACGGCTCGTTTCATGCGGAGTGCTTTATTTAAGAGAGCCGCGATcggatttttgttttgttgagaaAGTGCAgattgtaatttatttgaagaaaaatgtCCGGAGAGCGAAACCGCAGGTCGCTGGCTTTCCGAGGAGGTGGATTAGCCGTCACCGGTGCCAGCGCCGTCGGAGGCAACAGCTGCGAGGCCCCGGCCTGTCAAGACCGACATCTGAACGGGAACAGAGCGGATCAAGAGGACGACGGGGATCTGGGGGCGAAAGGACCGTCGCCGGGGAAAGTCGAGGGCGGGGGGTCCGTGAGCGACAGCACAGAGCCCGAGGAGGACGACGACCCGGAAGGGGGCAGTTGGACAGCGGGGAAAGATCACGGCAGGGGCGCTTCAAACAGCGTAATGGTGAAAACCGAGAGCTGTAAGCGGGCGACCGGCAACGGCGTGAACCGGGAGGACTGTCGCGCGGGAGAGGCGGAGGAAGCGGCGGCCGCTAGAAAGCCGCTGCTGGAGATGAGACCCCAGACGCTGCTCCAGAAACACTCGCTCTTTCAAGCCTCCTGGCTGCAAGAGTTCCCGTGGCTCAAATTCAGCCAGGGAACGGGGCTGATGTCCTGCTCCTGGTGCCATAACATCGCCGCCAGCAACAGCGACGAGCTGGTGAAAGGCAGCCGGAATTACAAGCGGGCCTTGCTGCTGAGACATCACCTGTCCTCGGAGCACGGCAGGAATGACCCGACCAGACAGGAGATGGAAAGGCCAGAGGACGCGGAGAACCTGGAGGTGGAGGACTATAGAAACAAGCCCAATGAGAACTCCTACTGCTACCAGCTGCTGCAGGAGCTGGACAAGCAGCGCAAGAGCGGCATCCTCTGTGACGTCAACATCGTAGTGGGCGACCAGGTGTTCAAGGCGCACAAGAACATCCTGGTGGCCGGGAGCCGCTACTTCAAGACCCTCTACTGCCTGACGAAGACAGAGAACTGCGACCAAACTACCGTCACACACTTGGACGTGGCGGCCGTGCAGGGCTTCTCTGTCATCCTGGACTTCCTGTACTCCGGCAACCTCTTGCTCACCAGCCAGAATGCCATCGAGGTGATGTCCGTGGCGAGTTACCTCCAAATGACCGAGGTGGTCCAATCATGTCGCGCCTTCATCAAAGACGCCCTCAACATCAGCATTAAGCAAGAAGCCCCTGATTCGGTGGTGGTCGACTACAACAAGCGACGGACAGTGGCGAAAGACTGCCACAGCGCCGACAAGAAGCCCAGCAACTTCTGGGCCACCAGCATCCTCTCCAAGCTGTCCATCAAGGCCAGCAGCCAAGTGAAGGATGAACCCAGTGATATAGAGGTGTCTGGTGGAGAAGGCTGCGCTTTGGGAAGCTCTGGTTGGGGTGGAGAGAACTCGTCGGAGTCGACAGAGACGGAGCCACAGGGTCCGGGGCCGGTGTTCGTCTGGAACGAGCCACATCCTGGTACTGGGGTCGTCGTCAAGAGAGAGGTGCATCCTGAGCCGGGCAGCGGAAGGCGGAAAAAGCAGACCGCCAAGCGCTTCGTCTACAACATCCCACCTGAGCCGGAAGAGGGTTTCGACGAGGGCATGTTCATCCAGCCGTCTGCCTCCTACACCAGAGAGGACTTCTCTTACCTCTCAGAGAATGCTGGAGAAGCGCCTGAAAACGCCCTCAATAAGCTGAAGTGTCCCCACTGTAACTACATTGCCAAGCACCGGCGAACACTAAAGAGACACCTGATCATCCACTCGGGCGTGCGTTCCTTCAGCTGCGACATCTGTGGGAAGCTGTTCACTCGCCGAGAACACGTCAAGAGACATTCCCTGGTTCACAAAAAGGATAAGAAATACAAGTGTATGGTATGCAAGAAGATCTTCATGTTGGCGGCGAGCGTGGGCATACGGCACGGCTCCCGGCGCTACGGCGTGTGCGTGGAGTGCGCTGACTCCCACCAAGGCACGCAGGAGGGTCTGGAGGGCATGCAGGACCTGGAATTCGCCCGCGACGAAGACTTTGACGAGGCCGGAGAGGGAGACGAGGACATGGAGGCGGAAGGGGAGGAGCCCAATGAGATTGACCAATCCAACTGCGAGGGTGATGCGGGTGCCACCCCCGAGAAGGACTAACTTAGACATAACCTGGTAGAGAAACGAAtcaaaatgcaaagaaaaaaaaatagctgggAAACAATCAACAATTCCAAAGTGCTATCAAACCTCTTTGTTGCACGTGAAGTTATGTCAAAGAGATATATAGCTTTGTTAGAGAGGGACTCCAATATTTAAAGATTGTTCTATGTGTCAGAGTCTGGGCCCTGTGCCTGTCAGAGAAAGAGGTATAAtgatatataacaaaaaaatcaggtttttctgtgatgtatttttttttttttgtaggggATGAGGGTGTACAGCGTTTGAGTTATAATAGGCCAatcatattaaaagaaatattaattatttaatttatgaagaAAGATATTATGGTCTTATGAAAATGATAGaattagatttcttttttttttaatgtacgtCTGCTTATTTTCAGTTCATAACTGCGCTTCCTGACAGACCTGATCGTATATTGCTCAGAGGAGGAGCTCGACAAAGAATGAGCATTATAAAAATTCCGCTTgcaggaagatttttttttttttttttttttttttactgcgtGTGTGTTTCCTTTCTAGGTATATGTTGTCATgaaattttatgaaatatatataaatatatatattttccttttcctGCACAAATCTTGGAaccaaaaatctgttttgtgacTCTAATTGACCACAGCCATATTTATGATTAAGTTATACGGGGCTGTTAGATCGTGCCAAGCAGAACGCACACCAAGATTTTTCGCAGGACACAGAACTACTGAAAATGCTGAGAGAACATAAAgcagagaaatatatatatatattaaaaaaaaacaaaaaaaaactgaaaaagagaaaatgctaaaatataagGGGAATATATTATTGCTAGCTTTATTTGAATCACAGCatcacagtaacactttataaagcattttgaCATTCACTTAAAGCTTGAATTTTGCCAAATGATGGAAACGTTTGGTGCTGTaacgcttttatttttattattatttttaaatactggaCCTACAAGCTGTATATGATGTTAATAATCGTAAAGCCTACTCAACTCAGTTATACTAATCAGCTTTGTATTTTACACTGTTGTGCTAAGGAGCCTATCAGGtatgcttttctgtttttaacgTCTTTTCTATgaaatgcacatacacacacacacacacacacacacacacaaaccatttgttgttgttaaaactACTGGCAGTACTTGTACAGATGGAACGAACCTGATGTTCTTGACCCTCCTGAGTTGGTTAGTGGTACTGAGCTTATTTTAAATCACTTGAACGACCTGTGTAGCGTTTTTGAAGAATGCAGATGGAGAGAGGTGGTTTGCAATAGACTCCCAAACATGGTTTTGGTCCCCTGTAACACTTGCGATCATTTCggtttggtttattttgtcGTGTGTCTGCTGAGTGGAAAACACTTTTGCTTGTGCTGATGTAGAGCGGAAGAAGGTCTATGGAAGTACATAGACGGGCACTTACTGTTCTGCGTTTTGATAATTTCTTATTTCCCCAAAGCCGGTCTGGATGGAAATAAATTGaaactgttgtgttttattccatactgagctttttttctttctttctttcttttttttttgacatttcattatttaatgctaTATATGTATTGACTCCAAAATGCAATCAAGactgttaatttttatttgtcctaCCAAAATCgttgtttaattgttaaagaTAATGTATAAGAAAACCAGGTAAATATTTAGTGTAGATTCTTGCTCGTGTATGTCGtcagatttaaatgtttttattctaaaGTCAATCATTCACTTTACCCTTTAGATGCTTATATTGTTTTACTTGTTCTACCTTctgaggttttgtttttgttcatccattgtgttttttttttttatttcattttaagcaCATATTTTTTAAGAGCTATTGTTTGTGGGTTAATTCCTAGGAGCAGGAGTTTCTGTTCATATGCAGTGGATATATTGAAGTGCTATACTGATACAGAAATCGTCTATCTTTCCCTTTACTCGAGatgaaagtgtattttaaaagctGTATAGAAGATCCTGTTTGTATTGCTTACCTTCAGATCACTGTgggaggatatatatatatatatatattatggagaaaatatatatatctatatagatatttaattaGTTGATTTAAATGATGGCACGTCGCTGCAGTTAACTGGTTAAAAAAACCTCGGCCTGGCTTTCACTGTTCTCACAAGACTTCACACTTTCTGTTCACACGTGCACGTTCACCATCATGTCGGTTTATggtctttttcttttgtctgtgtATCCGTTTAACTCACATTAATGTACTCCTTTGACTTTATGCTGTATATGGAcataacagacaaaaaaaaaaaaaacactacagaTGAAGGTTTTTTTCAGCTGTATTTTGTAAAAGCTGTTTCAAAGATGTATTTTTCAACTCTTACAGTGATGCAAACGGGGCCACGGGCTCACCTcaaacacaaatcaaatcaggttattctttttatgttttttcaagaattcaaatgaatacattttccttctctttcaatTGTACTACTGTTCCTctattataaattttaaaataaaactttgatATTTCTC

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10497 ZBTB10, RINZF; zinc finger and BTB domain-containing protein 10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU194441 lncRNA downstream 1484 8724506 ~ 8786729 (-) False hey1
TU194440 lncRNA downstream 12486 8724506 ~ 8775727 (-) False hey1
TU194439 lncRNA downstream 12486 8749025 ~ 8775727 (-) True hey1
TU194432 lncRNA downstream 129199 8658159 ~ 8659014 (-) False tdp2b
TU194433 lncRNA downstream 148556 8639428 ~ 8639657 (-) True G131675
TU194471 lncRNA upstream 114562 8920040 ~ 8920695 (-) True G131697
TU194658 lncRNA upstream 234470 9039948 ~ 9048451 (-) True G131820
TU194665 lncRNA upstream 275372 9080850 ~ 9081105 (-) True G131827
TU194681 lncRNA upstream 336375 9141853 ~ 9217661 (-) True G131838
TU194699 lncRNA upstream 454856 9260334 ~ 9268308 (-) False G131852
XM_043218166.1 mRNA downstream 30540 8754198 ~ 8757673 (-) False hey1
XM_043217899.1 mRNA downstream 49427 8727259 ~ 8738786 (-) True si:dkeyp-120h9.1
XM_043217901.1 mRNA downstream 49431 8727259 ~ 8738782 (-) False si:dkeyp-120h9.1
XM_043217900.1 mRNA downstream 49914 8727259 ~ 8738299 (-) False si:dkeyp-120h9.1
XM_043217959.1 mRNA downstream 61896 8672131 ~ 8726317 (-) True ripor2
XM_043218428.1 mRNA upstream 18280 8823758 ~ 8870740 (-) True znf704
XM_043218427.1 mRNA upstream 18280 8823758 ~ 8870740 (-) False znf704
XM_043218429.1 mRNA upstream 26467 8831945 ~ 8870739 (-) False znf704
XM_043217656.1 mRNA upstream 67634 8873112 ~ 8915446 (-) True pag1
XM_043218394.1 mRNA upstream 244308 9049786 ~ 9055795 (-) True gmpr
XR_006247085.1 other downstream 30540 8751369 ~ 8757673 (-) False hey1
XR_006247069.1 other downstream 49427 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247071.1 other downstream 467312 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 467328 8287294 ~ 8320885 (-) False trit1
XR_006247052.1 other downstream 658943 8118949 ~ 8129270 (-) True khdrbs1b
TU194713 other upstream 503242 9308720 ~ 9309352 (-) True G131861
XR_006246990.1 other upstream 854417 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 1502480 10307958 ~ 10311928 (-) False elp2
TU195129 other upstream 1502480 10307958 ~ 10310675 (-) False elp2
TU195233 other upstream 2364792 11170270 ~ 11170913 (-) True G132219

Expression Profile