RNA id: XM_043218142.1


Basic Information

Item Value
RNA id XM_043218142.1
length 1914
RNA type mRNA
GC content 0.47
exon number 2
gene id arl4ab
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8556900 ~ 8559488 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAGCTCGCTCTAGAGTCAGTGAAACAGGCGCTGTTACAGGGAGTGGATACACTTGTCGGCTCAGCTGATCTGAATGGCAACAATATTTTGGAAATAGTCGTAAACATTTTCATCTAATGATCTAACGAGCAACGCAAGGTTCGCACTAAATAAGGTTATAGCAGCAGCAGCTTCTCGGGGGAACGAGAGAAGCCTTGTGAATATTTGGTGAAGCATCAGCGGCAGCGGCGACACCTGGTCTCCTGAGTCTCCGCGTTCGCTTTCATCCTCATCAGAGTGGCGGTACAAGATGGGGAATGGATTATCAGAGCCCCATGCCATCTTTCCCTGCCTGCCGTCCTTTCAGGCCCTGCACATTGTTATTCTTGGCTTGGATTGTGCCGGTAAGACTACCGTATTGTACCGGCTACGCTTTAATGAGTTCGTGAACACCGTTCCCACCAAAGGCTTCAACACAGAGAAGATCAAGGTGACTCTCGGTGGGAAAGGCCGGACTGCAACCTTTCATTTCTGGGATGTAGGAGGTCAGGAAAAGCTCCGGCCTCTTTGGCGCTCCTATACGCGGTGCGCCGACGGCCTCGTGTTCGTAGTGGACTCGGTAGATGCCGAGCGCATGGAGGAGGCCAAGACGGAGTTGCATAAGATCACACGGCTACAGGAGAACCAGGGGGTGCCCGTGTTGGTGGTGGCTAACAAGCAGGACCTGCGCAGCGCTTTGCCACTAGGTGAAGTCGAACAGATGTTGGCACTGAACGAGCTCGGCTCTCACACGCCTTGGCACCTCCAACCGGCCTGTGCCATCATCGGAGAAGGTCTACAAGAAGGCCTGGAACGTCTCCACTCCATGATCATCAAGCGGAGAAAGATGATGAGACAGCAGAAGAGGAAAAGATGACTGTTTGGTGATGGGATGTGAGCTGGATGTGGTGGTAGGCCTCTATGAGGGCTCTGCTGGTGATGTGCCATGGGCCTTTGTGGCCCTGCGCTCCTGGAATTATTGTTTCGGCGGGCTGAGTTTTATCAGTCAGATGGTTCTGGATGAATACAGTTCAGAGACCGAAAGAGGACAATATTGATTTTACCACTTTGGTTGTTGGATTGTAGCAGCGGTGGGACGATCACATGGAACTTTTACATCAATACAAGTGTTACAAAACGTCAACAGGTCTTGTGGTACATTGAGTTGTCATGAAGGACGACACTGGATTCGAACTTGTAAATGACGAAGACCTATCCCTGAAGTCTTTGTCCTTGCGTCTGAAGTGTTACACGTATCCTAGCATCCTAGCATTCATGTAAAGTCTTGAAATGGAAGGATTGATTACCAAAGCTGCCATGGACATCATGAATAATCCAATGTATACATTCAGGTGATGTTATTTCCCCCCATTTGGTTTTATCCAGAATGGCCAACCATCAATTCCCCTGGGTGTTTGTTGTCCCGGTGGACAGGGGAACCAGAATAAGCTTTATGGATCACTTGTTTGGGAATGCACAAAGGTTGAAATCTGATTACAGAAGGGTTGACCACTGAAGTAGTTCAACAGGTGAATGTGGTAACTGTCTAGAGGTTAACTCAACATGTTGACGTCGTAGCTTCTCCTAAGTTTGAGGACTACTCCTAGCTGTACCTACATTGTGTGCTTCCCTGAACAACAAGAGATGTTTAAATGCACTTTAGCAATTCCCTTTTCTAAACTATGAACTTGCAGCAtctgatttttttgtaaagagtTTATCATGCTACTAAAAGAAGTAATGTATTGCTTCGagtgaagcattttttttaatatccacTGTTCCACATTCTAATGTGTCGGTTTGTCACTCAGTGCTTGTGTGTTGGGGGATGTTCATATTTATGTGTCAGAATTTGTACACTTTGAATAAATCCACAACTACACTAAACATCA

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07945 ARL4; ADP-ribosylation factor-like protein 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU194405 lncRNA downstream 1308 8541224 ~ 8555592 (-) False G131654
TU194404 lncRNA downstream 1308 8551961 ~ 8555592 (-) True G131654
TU194226 lncRNA downstream 201783 8353533 ~ 8355117 (-) True G131511
TU194223 lncRNA downstream 273459 8283098 ~ 8283441 (-) True G131508
TU194222 lncRNA downstream 274076 8282601 ~ 8282824 (-) True G131507
TU194433 lncRNA upstream 79940 8639428 ~ 8639657 (-) True G131675
TU194432 lncRNA upstream 98671 8658159 ~ 8659014 (-) False tdp2b
TU194440 lncRNA upstream 165018 8724506 ~ 8775727 (-) False hey1
TU194441 lncRNA upstream 165018 8724506 ~ 8786729 (-) False hey1
TU194439 lncRNA upstream 189537 8749025 ~ 8775727 (-) True hey1
XM_043218510.1 mRNA downstream 107156 8436291 ~ 8449744 (-) False bzw2
XM_043218511.1 mRNA downstream 109645 8436291 ~ 8447255 (-) True bzw2
XM_043218137.1 mRNA downstream 121762 8430681 ~ 8435138 (-) True rbbp4
XM_043217433.1 mRNA downstream 144066 8377097 ~ 8412834 (-) False kiaa1522
XM_043217430.1 mRNA downstream 144069 8376208 ~ 8412831 (-) False kiaa1522
XM_043218572.1 mRNA upstream 1889 8561377 ~ 8569332 (-) True scin
XM_043217458.1 mRNA upstream 17778 8577266 ~ 8581347 (-) True tmem106bb
XM_043217454.1 mRNA upstream 40618 8600106 ~ 8627992 (-) True necab1
XM_043217952.1 mRNA upstream 95010 8654498 ~ 8659486 (-) False tdp2b
XM_043217951.1 mRNA upstream 95010 8654498 ~ 8659486 (-) True tdp2b
XR_006247071.1 other downstream 235999 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 236015 8287294 ~ 8320885 (-) False trit1
XR_006247052.1 other downstream 427630 8118949 ~ 8129270 (-) True khdrbs1b
XR_006247051.1 other downstream 427642 8121512 ~ 8129258 (-) False khdrbs1b
TU193992 other downstream 951757 7602133 ~ 7605143 (-) True G131373
XR_006247069.1 other upstream 167771 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247085.1 other upstream 191881 8751369 ~ 8757673 (-) False hey1
TU194713 other upstream 749232 9308720 ~ 9309352 (-) True G131861
XR_006246990.1 other upstream 1100407 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 1748470 10307958 ~ 10311928 (-) False elp2

Expression Profile