RNA id: XM_043218313.1


Basic Information

Item Value
RNA id XM_043218313.1
length 1745
RNA type mRNA
GC content 0.48
exon number 5
gene id asb4
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 12552083 ~ 12556127 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTAGATAGATATAATACATTAACATAGCGCCCTTAGACTAAAGCTCTTATAGTATTTCTTAAATGCAGTCGTCATTTGACTGTAGTTAGAAAAGTTACTATTATAGCAGTTTGTGTGAAAGTCTAAGGCTTGTTTGGTCCAGAGTAGGCAATGCTTTGACCTCTTCCCCTCACAGTCTATTAATAGTCAGACTGATGGCACCGACTCGACGCCGACTGCGTTTCGCGCTGCGGCTCCTGACCACTGGAAGTCATAAAGCTTTCTGCAATTACTCAAACGTACCGAAAGCGTGTTTCTCGCGGATTAATCGGCGCGCGTGTGAGATATGAGCGGGCCTCGAGCGGTTCTCGGTTTAGCGGAGGAAGATAACCGGACGCTGTCGCGGCGGGAAGCTGATAGCCTCGTGAAAGCACGCTTTCTAGAAGCGCTCGCGCGTAACGATGCGGCTGAGGTCGCCAAAATCCTCCGCACCACCAGCATTGACATAGACGCCGTGTTGGACGTGGAGGACCGCGACATGATCCTTGCCTCGTATAAGCAAGGTTACTGGCTACCAAGTTATAAGCTGGAGACGTCCTGGGCGATGGGTCTTCACGTGTGTATGATGTACTGTGCGCTGGAGAGTGCCATAGTTCTTCTGCAGAATGGGGCAGCGGTCAACAGGAAACCCAATGGGAAAACCCCTCTACATGTGGCCTGTACAGTGTCTAATGCTGACTGTGTGGAGCTCCTGCTGGAATGGGGCGCGCGGATCAACAGCATGTCCCTGAGTGGACATGCTCCTTTACACTACTGCGTTACTCAAGAGTCTTTGGACTGTGCCAAACATCTTATTCTCAAAGGTGCAAATATCAACATGCCCAGTGAAGAGAACCAGGACACCCCTCTGCACACTGCGGCTCGCCATGGCATCCCACAGCTGGTGGCTTTCTACATTGCCCATGGAGCTGATATCAATGCAGTCAACGGTTACATGGAGACGCCTCTGATCACCGCCGTATTCTGGGCCATGGACATTCGCGAGCGGACCTATAGCTCAGACCACCATCTTGTCTGCAGGATCCTTTTGGACCACAACGCTAACTTACATCTATATGAGGAAGACAAGAAGACGGCGCTGCACAAAGCTTGCTGGAATTGTGACCACGTGCTTATCCAGATGTTACTGGAGGCCGGCGCCAAGACCAATGCTATGGATATCAACGGATGTGCAGCAATACAGTATCTGCTGAAGGTGACGCAGATCAGGCCGTGGGCCATTCCTGAACACTGCTATCGGCTGCTTCTGAACTACGGAGCGGCACGAGTCTATCCACCACAGTTTCACAAGGTGTTGCAGGCATGTCACGAATACCCCAGGGCAGTGGAGGTTATGATCAATTCTTATGAGCATATCaagtacacaaaaaaatggagAGCTGCTATTCCTGAAGCTGTATATGAGAGGCACAGAAATTTCTATGATTCTCTGTTCGCTGTCTGTACCAACAATCCACGCACTCTACAGCATCTGGCCAGATGTGCAATACGAGCTGCAATGTTCAATCGTTGTGAACTGGGTGTCCATCATCTCCTTCTTCCTTCATCGGTGAAAAAGTACTTGCTTCTGGAGCCTGTAGGAATCATATACTGACATTGTTTCTGCATTACACCTTTATGACTGTttcttcaaattcaaattttgttACCAAGTAGAAAATTAGAACTTTtggttcaaaatatttttttttctttattttatccTC

Function

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
K10326 ASB4; ankyrin repeat and SOCS box protein 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU195532 lncRNA upstream 51550 12499142 ~ 12500541 (+) True G132421
TU195496 lncRNA upstream 128199 12423656 ~ 12423892 (+) False gngt1
TU195480 lncRNA upstream 154730 12378273 ~ 12397361 (+) True G132376
TU195484 lncRNA upstream 163478 12385052 ~ 12388613 (+) True G132379
TU195407 lncRNA upstream 302668 12248771 ~ 12249423 (+) True G132317
TU195568 lncRNA downstream 837 12556964 ~ 12557202 (+) True G132448
TU195612 lncRNA downstream 111166 12667293 ~ 12668554 (+) True G132472
TU195654 lncRNA downstream 230517 12786644 ~ 12865595 (+) True G132498
XR_006247014.1 lncRNA downstream 275514 12831641 ~ 12834525 (+) True LOC122323456
TU195692 lncRNA downstream 465310 13021437 ~ 13026026 (+) False jtb
XM_043218304.1 mRNA upstream 3252 12510975 ~ 12548839 (+) False ppp1r9a
XM_043217798.1 mRNA downstream 13106 12569233 ~ 12621020 (+) False LOC122323728
XM_043217801.1 mRNA downstream 13106 12569233 ~ 12621020 (+) False LOC122323728
XM_043217799.1 mRNA downstream 13106 12569233 ~ 12621020 (+) False LOC122323728
XM_043217800.1 mRNA downstream 13106 12569233 ~ 12621020 (+) False LOC122323728
XM_043217803.1 mRNA downstream 13106 12569233 ~ 12621020 (+) False LOC122323728
TU195256 other upstream 1028210 11522266 ~ 11523881 (+) True LOC122323782
unassigned_transcript_2194 other upstream 2623618 9928400 ~ 9928473 (+) True trnai-aau_70
TU194625 other upstream 2913130 9636973 ~ 9638961 (+) True G131801
TU194607 other upstream 3013598 9536415 ~ 9538493 (+) True si:ch211-215i13.3
TU194520 other upstream 3388019 9160391 ~ 9164072 (+) False LOC122323856
XR_006247120.1 other downstream 748879 13305006 ~ 13305144 (+) True LOC122324249
TU196534 other downstream 2231417 14787544 ~ 15212430 (+) True G133066
TU196550 other downstream 2278510 14834637 ~ 14837952 (+) False LOC122323257
TU196586 other downstream 2593177 15149304 ~ 15187839 (+) False LOC122323518
TU196623 other downstream 2800613 15356740 ~ 15361845 (+) True anxa14

Expression Profile