RNA id: XM_043218428.1


Basic Information

Item Value
RNA id XM_043218428.1
length 10068
RNA type mRNA
GC content 0.44
exon number 8
gene id znf704
representative True

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 8823758 ~ 8870740 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AACAAATTTCTGGCGGTCTGCTCCTCGGCGATTTATCGCATAAATACCCGTTGTGTGTATTGTGAAAAATACATCGTGTTTATCGATCCAAAACCGCCGCTCCGCGCCGCGTTTTACCGCGACCCGTCAGCTTTAAGGGAACGGCAAGCAAAACAAACAGGTCGACAGAAGAAAGATATCGGTTGCCGGTCGGTGCTTCGGTCAGACGGACAGAGAGGTTATCAAGCGTAGCTCATTTGCATGTTGTAACGGTTCGCTTCTCGCGCCGGTGAAATATGCGGATGCGCTCCAGATCTGTGGTTATGTTGTCGTATTATTCGCATGTTCGGCCCGTTATGACGGTCAGTCCGTTCGGGTTTTGTCAGCGTGACATTTCGCGTTTTTAAAGCGACATTGCCTTGCAAAGATCGAAGTCATTTTTATTCGCGCATTTCACTgatatatcgactatgcatacGCGGCGGCTGGTGAAGCGCTCGGTCATCGGGAGCCGCGTCTACGCGCCGGGTTTAACGGGAGACGCGGCTCCGCTCACGGGAGTGATCCAGGCTGTCAAACAAGACAACAGAGATGCCTCGACCGGCCATCGGCGCAACGTGTACACGGTGCTCATGCAAGACGGGAGCTTGAAGGAGTACTCGGAGGAGGAGATTGCACAGATGACCGCGAAAGCGCCGCTGAAGTCGAGCCTGAAGaGCACCTGTAATGGTGGCCAGCGGGACGGGCCCACGCAGGGCCAGAATGGGGGCGTGCAGAGAGGAGAGGCCCCCTCCCTCAGCCCTGAGAGCACAGAGGAGCCACGGGTGCTGGAGCACAAGAGGACGGGACGGGCGCTGGAGCCGGAGAAAGATCACACCCGCTCTGTGTCTCTGCTGGAACAAAAACGCAAGGTGGTCTCTTCTAGCATCGACGTACCACAAGCCAGgAAGTCAGAGGAGGAGGTGGACATGGATAAGGTGACGGCTGCCATGGTGTTGACCAGCTTGTCCACTAGTCCTCTGGTGCGCAGCCCTCCTGTAAAAGTTAGTGAGGGTCTGAACGGCTCGTGGAAGGACGGGGGCTTTACTCCATCCAGCTACAGCAGCAGTGGATATTGGAGTTGGAGTGCGCCCAGTGACCAGTCCAACCCATCCACGCCGTCCCCACCCCTGTCCGCTGACAGTTTCAAACCCTTTCGGATGCCCAGCCTCAGCGGCCTGCCAGATGACAACATCGATGAGCATGATGGGAACAGCTTGCTGTTTGATGAACCCATCCCCCGCAAACGCAAGAACTCCATGAAGGTGATGTTCAAGTGTCTGTGGAAGAACTGTGGGAAGGTCTTGAGCACAGCAGCCGGGATCCAAAGGCACATTCGAACCGTTCACCTGGGGAGGAACTGTGACTCAGAGTGCAGTGACGGAGAGGAGGATTTCTACTACACTGAGATCAAGCTGAACACCGACTCTGTGGCGGACGGTTTGAGCAGTCTGTCTCCTGTGTCCCCATCTGTGCTGTCCCCCCCGCCGGCTTTGGACCAGAGACAGCCGGATGGCACTAACGGAGCAAAGAGCGAGAAcagcaccaccaccaccaccaccaccaccaccacctctCAGCCGCTCTGCTCCCAGCGCACTCTACCTAGTGCACACAGACCACGCCTACCAGGCCTCCCCCACTCACAGCCGAACGCAGGGCTTTGGGGAGCAGCGCTCTCAGACCATTGCGGTGCTCTCGTCTCCCCCCAGAGCCGCAGGCTCACTCAGGAAGTCACGAGGCGAGGGAAAGAAGTGTCGTAAGGTGTACGGCATGGAAAACAGAGACATGTGGTGCACGGCCTGCCGCTGGAAGAAAGCCTGCCAGAGATTTGTTGACTGAAACAGCTGTGACGgcttacacacaaaaacagGGTGGGCTTCCTTTGCATGCATAGCATAATGAAATACATCCCTTCTCTTTCTTACTGACCACAGACCCACCCTGCTTCACCTTAAACCCACATGGACTTCGAGGGTCAAGCCCTTATGCATTCCCTCCTAAACCATCGCACTCCCAATCTTTGCAGATTTCCAACTCTCCCTTTGAGGCGGATTGCTTTACactgcaaaaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagacttgtgatccatctctttttgtttgtgttcagtATACTGCTTAAAAACATTCTTGTCAGTTCCTAAAGGACCAGTCAGGGCAAGACCAGCCTCTGTCCATGCTCTTtttaaaagagaagaaagctCTCTTTCAGACTGTGCAAGTGCTATAAACCCAACCGGAGAAAGTGTTTCTTTTTCCATGggcacattttcacatttctccTGCCCATTTTACTGAAGGTTAAGGGTTGGACAGCGAGAAAACCCTGTCTTCTCAAGAATGTACCACCACAGGGGTTTGTTTTGGGATGTTGACTGGACAGCTCCCCTGAATGGAAATTtctcaatgcaaaaaaaaacaaaaaaacaacgtaaaaaataaatatgggaAGAGAAGGACTTTCAGCTCCCCCTTTCAGCCGTGCTGACACAAGCAATTGCACCTACGAAGGACGGATTTTATATCTCTGGTTTTATATTTGCGTTTACCAATAGGACATTTCTTTCAGGGATGCGATCAGTAAAAGCAAAACCAGCAGTTAGATTTTACAGCAAAGAACTCAGTGCTTTTTGTCACAGGAATACCTTCTTGCTACcaaaaagggtttttttatgtgccatttttttcttcttttttttgctttgtgtgtAACTGACTTCAACAGAACGAAGTACAAAGACTGCGATCATTAAAACCCAGTGGCACAGACTCGCATCAAAGTTAGAGATCGCAAGAAACAGCCATTCAGGCAACCTCTCCTTCCCATTGGACTCCATCTGCAGGAACGAACTGCATTCATATTAGAGCCATATATGAACCGTGGTGGTTTCACGCCACAGTCTGTTGCCTAGAGAGGCTCAACCAACATgcccaagtaaaaaaaaaactctgcaaAGTGGTTAATTTTACCTCTGAAAGGTGAAGAGCTCTTTACCTCTCACCTTTTCCTGACCTCACAGGTTCAAGTAggaagtaataaaaataacaaatgccaCATCTACTCCAGCACAGGAGCTGGAAGCACTCAGATGCGGTGGTGTTATTATTCTTCTGTAGTTGGTACAGTATTGTATAACACTGGTCACAGGAGGATGGACGTCTTTTCACGATGGGCTTCTTTGCAAAGGATGACCAGAAAAATTGTCCCACGACGTCAACACTTGGTTTGGCTCTTAAGGAATATGGCTGCTTGGTTGTCAATTGTTATCTGGCACTGCTTTGGTGGCTCTGATGCAGTCTAAAATATGATATCATCTACGTAACATCAACAAGCTAGTTAACTCATAAATCTGCAAACAATGCTAATTGTGATCAACTCATTGTCTGTATCTGTTTTCTTCATCACACTGTTTCCCTTACTGtcgatatatatgtatatagataaGGTATATAGTATTAAACCCCCAAAACAGAGTGTTTATGCTCATCGTAACACTTGGTTTTAATGGTCGAACGGCTTTGTTCACACTGCACATATATCAGATTTGTTTGTATAATGTAGTCAATATCCTATAGCTCCAAATGGGTTATATACGAATGCTATAAACATCATCCTGACAAGAGATTAAAAGAAACATGGATCTAAAAGTACAGTAGACTACTTGGAATCTAGTTACAATTGACATTAAGAAATACGCTCTGATTTCACACTCATGAACATCCTCAGCGGTTCAGAATACAAAAAACTTgatcatttaatgtaatgtaatttcaaACATGTGGTTTGGATCTGGTTTGTTTAAtgtggtacaaaaaaaaatctattgattgaaaaaaaaataaataaatgtaaaaaaaaaaaaaaaatctgaattttgcTGCCTTGTGAATAAAGCCAAATAgaccaacagaaaaaaaactaaaggcattttaaatgtgaatctATAATTAAGATCCatgtaaaattaatatgaatCTAAATAACATCTCCAAGAAAACACTGTCACTGGTTTAATGTctatatagaaaaaaaagaaaattcagaaaCAACCTAGAGTTCATGACTGTTTCTGCATTTTGATCTctaattttcctttttctcaCTTTCTGTTGACATGATTCAACAGATCTTGCAAGGAAAAGGTCTCCAGGGCCTTGCGTCTTTCCGTATGACTGGAGGCAACCTGTTTGTGAAAGCACAGCTATGCTGAAGCCACACACCAGCACCCATGGGCTCTAGCACTCCAATTCTACTCCAATGCTTATTGAAACTTTTTGTGATCTCATGCCAGACATGAAGTTGAGTTTCAATAATTAAACAGCTGCATATTTCGGCCCCTCCGCTGGTGTGAGGAACATCTCAGAGGCTGCTGCTTGTCCCTCCATTCCCTTCCTGGTGCTATTTTAGACCAAAGGGTCTAAGAGATCTCACAGGCGTTTTACGTAAGAGGGCAAGCTGATGTCTACAGTTGTTTACATTGAGAATTGGGGAAACTCTTTCCATCACGGTTTCCTACAAATGAGGAAGTAGAAGGATATTTCTAAATGTTAGCTAAAAATATGCTCTTGCCTCGGATAAGCTGTTATGTGAAGATAAGATCACGGTGCATTTGGTTTCTAATGATGTTTCACACACACCTGTCACCATGGTGCTTTTGTATTGGCTGCAGTTTTGTTAGCTAGGCCACGGCGCATTACTCGTGTTCATTAGGGGTGCTAGTTTTCTTGTGCACAGGCCTTTGTTTTGTCGTACAACGTGTAATTTAACATGCACATGGTGCGTATCAAGCTGCAACATGAGTGTGGCGTGTTTTCACTATTTACTTTCTTTATCGCCAACTTCGTACACAGGTTAAACAGTATATAATGTACCTTCAATACTTCTATAAGCTACCTGGTAAACAGTATTTAGGACTAGTGCTGCTCATGAATACCTACTTGGGTCCATGTCTCATAGTAAAGCAGTACAAAGCTTTTAATGTTCAGATCCAGCAAGATGCCGAGGTGTTAGCTGTCTTTAGCCTAAGTAGTCTTCTCTGGTTCCGTGTAAACATACCGTATAGGTAATTAACAACAATAACTAATAACGCTATCATATTACTCaaaatgtgtaactgttttgatCAGTATACTAAGCTACTTTAACACGCCGGTGTACAGATCCTAGGGAACAGATTAAGATGCTTCCCATTCTGAACTTTCACCAGGTCCAGAGTTTAACACGCCAGTTTAGCTGCTTTAAAAGATGCAGAAAAGTCTCGCCATCTCTTTTCCCACGCATCCATGTGAGGAAAATCTGAAAGTGCGATGTTAATCGGATACCCATATGTCTTTGGTTGGTATTAGTGTTGGATCTGTGCAGATGTTTAGAGTGGGTGTGCGTATCCCATGTCAGACTGACCCAATCTGACTGTCTTAGCGTAGACTGAATCGTTTGTGTAACTCCAAACCGCCGCTCAGCTATAGCCAGATGGCAGATGGGCCACTCAGTAGTCTACTTACAtaacttgtgtgtttgtgtcgaGGCACAAACAGCAAGAACAAGTAGAGGCCGTTGATGGGACTgagtctgcaaaaaaaaaagaggctgtAGTCGAGAGGAACATTCCAGACTAcacatttaaatctttttgttaTGAAACAGCATCATCAGGATGGAACGTACTCTCTATTAGGGGGCTTATAATATCTGCTGTCACTGGACAGTATTGGCATTCTGCAATGCATACTAACGAGAAATAGCTGCCGGGTTCCCGTGGTATATGATCAGGTCATGTCTATCCTAGGTGGAGAGGGGTCCTGAGAggatttgttttagtttttttccatgGAGGGGGCCAGTCCCTCTGACCGCTTTCAGGAATGTATTTGTATGAGAATATATAGGAGTCTGACTGTGCCTTGGTGAGGTCTGAGATTGTGCGTGGAGATGCACAGAAAAGCAAAGGAATGTTTCTGGTGTCGGCTTGTCTGAGTTCATCATTTCGTCTGGATTTAAATGTGTGGGAGTGGAGGCCCCTTTTTTTACTGATTTGAGGACTAGCTctcgatttatttttttttccagctcaaAGAGTCTTTTGATGAATTTGAAGCTTTGGGGGTGGGGGGGTGTCTTTTCCCGGTTGTGCTTTGTACACGATTTTTAGCTACAATATCGtagttgtttttgtctcgttgTTTTCATCTCCGGTTTAGGAAACGCAGCGGGAAACGTTTAATCAACATTTCAAACAGGGGTTTGTTAAATACGGCTGCGTTTTAAGAACTGGGGAGCGTTTTTCTTACAAGATGCTTAAACAGTGAGATCATCCATTATTGTCAGAGACTAAAACTCCAGCCTAACCGATAGGACCATGCACAGAAGATCTTAGCATTATGAATCACAAGCTTGGTTGGATCCAGATACCGATTTATGTTTCCATCATGTCTTTCAAAGTAGGGCTGCATGATGTGGGGGGAAGATTTCTGTGCGTGTTTGTCATTACAAGATGATTTTAGCTGCATATTGACTTaacaaatgcacattataaacgACTCAAACTCCACGTGTTTATATGGAGCAGCGTTTACTGCGACACCGACAACACCAGATCATAAGCTGCTCATGTGTAACCGAACACCGTGCTGCGCTTCAGTCTAAAACACacattgcatatatttattaagttacattttatgatttgaTATTCGCATCAAGCCATTTCATGATTTGGGTTTTAATTTTAACGAATCATGCAGCCCTATCTCAAAAGATCTCAGACAATAAGCAGGACATAATGCAACACGTTTATCTCAAGCCTTTTTTGTATTGAGAGAAAAAACGTCCAAACCCATCCAAGAATCTTCAAGAAGTCTCTTTACATCTTGAAAATAAGGTGCCAAAAGACACCATGGGAATGTAGGCTCAATGCTCTGAATGGATTATCTCACTGCTGACCTTGTCAATCAAGAACCATGTTAACCTCAAGAACTCAAAGACTGTCGCACTggatttttacactttttcaaGTATTTGCTGAtctaactgtattttttaatactgCATGTGCATGccgaagaaaacaaacaaaaaatatgatctGAATTTATGAATgttgtttgtgatgttttatctgTAAAAACAGGCACAGGGCAGGCAGGCTGCTGTTACTATAGTAATGACATGCAAAATCTACTTCCTCTGAAAGTGTACTCGTTTCCATCATGCGATTTTAGCAACTTTTCACAGTCGCCCATTTACATGCTATATTCTGACGCAAAgggcacatttttaaaagggacaGTTAAACACCCCAAAAAATGAATAGTGTGGATAACGGGGCCTTAAATGCAGAGAACCACTGCGTGAGCCGTTTAGTATGGATAAAAAGCATCctgaacatttttcaaaacatctctttttgttttccagACAGCAACATACAGATTTAggacaagtaaatatttttgggGGTGATCTATATCTTTAAGATAAAGTGCTtgactctgattggctgaagagCTGATAGAAACTGCCACATTCTGCAGTCATTCCACTGGGTCTGGGCTAAAAGCCAAATTTGTGTGGCTTCTTAGACCTGTTCTATACTTAGCATCGTGTTCTCATATCTAGTGATTTTATGGGGgccataaaaacaaacagatgctGATGATAAAAGAACCAGCTTCTGACCATCGTTGAACAGGGAATAATAACAAACGCCTGATGGGTACTACATAAGCACTTCGAAATGATCTAAAAGAGAGGACCAGTTCGTCTCGAGGACCAATGTAGTCAGCCCaaactgtgctttttttaatttttggttcACACATTTCTGTCCCATTGTCTGTTCTTTTGACATTCCTGATTTTACAAGTACTGTTTGATGTTAAGAACGGGCATCTGATGCCCTGTGCACATGATGGAAGCCTActgtttaaagagaaaaagggaAAACTCAGGATGTCTTCATCTTTGCATGCCGCTGCTAgcagaaaaaaatgcagcagTTGAGTTGTAAAGCCATAAAGGAAAAGAGGTGTGTTTGGGGTGACTCATGCCATTtaccaaaattattattttgaccaGTAAGCAATGTCTAGACTATATTCAATAACtgtgtattattcattattGCACACTGACTATATGTATATTGGAGCTGTTCGTTGAAGAAGGTACTTGACATCTCTATGCCAATGTGAAGGATAAAGTCATTGATGGGGGACAGAATTTATTGTAGATGCAATAGCTATAAATGTAGCTATGAATAAATggatgatatatttatatatgattataaaagaaaatattgttatCCTGAAGAGGGACACCCTTGAATTTGGcaggttttaaaataacaaaaacaaaaaaaagactttgtaCCATAAAAAGATTATACCATATTATGCATATAACTTTTTGACATCAGCACTAACGACCCGGGGATTAGGCCTACAGCCGAAATTGTTACTTAGGTTCAAATTCAACGAAAACCCAAAGATTATTTCTCAAATAAGGCACGACATATCACAGCAAATACTCAGCATAAATGTCACTTGGCATTAAcgtaaaataacaataataagctTATTATGGTGCAGTCGCATTTGCAAAACTTTGTGGTGAATTTTTGTGGGCAAACTAGCCTTTTGTCAATAACCCAGAGGTCACTTCCAAACCAAACATGTTAACAGTCTGACGAGCTAGAATCTGCTAATTTTCACCTGATTATTCCCAAATGCTCGGCTTGCTAGCGACATGGTTTCAGTTTTCCCGTAGAAAATTCACGCGCGAAGCTAAACGTGACCGCGCCTTAAAGGGCCATTCACACGGAACGGGTTGTGGCGTTCAAAAACGCGGGAAAAGTTTCAAAGCACTGCCTGACTTTAAGGGCGTCAGtgtagcattattatttttttttttttacaccgaACAACGACTGAAAACGGCGCCGCGTGTTTTCCATTCCTAGGCGCGGTTTCCCGCGTTTTTAACAAACCCGCGTCGCGTCTGGAGCGAACGGCCAGTTATCAAAACGCTGAAGCGTTGTTTATCCGACGTAGATGTCGCCTGACACACACTGACCTGTATCCGAGGCGATGGGATAAACGGGCGGCCCGTCTCaccattaattacatttcatccTGGGTTTAACGCAGACGTCGCACGCCAGGCCGAGCGCGTCGCGGTGACGTTCGTTTCCCGCCGGGCTCACGTGCGCCGGCCCCCACGCGCCTTTTCGTCTCCGTGCACCCGTCGTAACGCGCGCGTTCAGAGCTCTTTCTTAACGACGGCGATTGCTGCTGAAGGCCGTCAGCCGGCGACAATTAAcggaatgaaaacaaatgtagcCCTGTTGTTAAACGGCGTCGAGTATCAGCAGAAAAGAGGGCCTTAATTAGaggatattttttattaaggctTCGTGCCGCTATATTTTGTCATTGTGAGTGTCTGGTCTGTGTTCACTCGGATACAATTATGCAATTTTATGCTTTAGTGCACAGGTTTACGCGGCAACACCTGACAAATATAACTCATGATAGACGGAAAGAAGTTATTTTTACACCGCTCGCATTTACGCGCACTAGTCTCGATAGAGGGAGCCGATGATATTTCATTATCTGGACTTGATATAAAATATCGCAATACATTAACTGAAAGCACTTGCTTCGTGTGCAACGTCTTATACTGTTTATCTAATTGCACCGTTTTGTTCCTTCTCCTCGTTTCCCCAAAGTTCAATAGATTTTACTCCTCTTCCTCCCGAGGGAGAGAACACTTGGTGactgttattattatctatCTCACTTGCTGGCTGTACTAGTTTTTACTCTGAGCTGTGTGTAAATAGAAACTGCCATTGTAATTGTGCTACGGTGACAATGTTCTGGTGCTCGTCAGTGccgctgttgttgttttctttggtGTAAAGACCTCTTCCGAGGGGCCCGTATTCGTACGAGCTCCCGGTTCGTGGTCGtggaaaaataaagacaaattttTTCGGCAGCTGTTTACTACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU194441 lncRNA downstream 37029 8724506 ~ 8786729 (-) False hey1
TU194440 lncRNA downstream 48031 8724506 ~ 8775727 (-) False hey1
TU194439 lncRNA downstream 48031 8749025 ~ 8775727 (-) True hey1
TU194432 lncRNA downstream 164744 8658159 ~ 8659014 (-) False tdp2b
TU194433 lncRNA downstream 184101 8639428 ~ 8639657 (-) True G131675
TU194471 lncRNA upstream 49300 8920040 ~ 8920695 (-) True G131697
TU194658 lncRNA upstream 169208 9039948 ~ 9048451 (-) True G131820
TU194665 lncRNA upstream 210110 9080850 ~ 9081105 (-) True G131827
TU194681 lncRNA upstream 271113 9141853 ~ 9217661 (-) True G131838
TU194699 lncRNA upstream 389594 9260334 ~ 9268308 (-) False G131852
XM_043218138.1 mRNA downstream 18280 8788213 ~ 8805478 (-) True zbtb10
XM_043218166.1 mRNA downstream 66085 8754198 ~ 8757673 (-) False hey1
XM_043217899.1 mRNA downstream 84972 8727259 ~ 8738786 (-) True si:dkeyp-120h9.1
XM_043217901.1 mRNA downstream 84976 8727259 ~ 8738782 (-) False si:dkeyp-120h9.1
XM_043217900.1 mRNA downstream 85459 8727259 ~ 8738299 (-) False si:dkeyp-120h9.1
XM_043217656.1 mRNA upstream 2372 8873112 ~ 8915446 (-) True pag1
XM_043218394.1 mRNA upstream 179046 9049786 ~ 9055795 (-) True gmpr
XM_043218395.1 mRNA upstream 179046 9049786 ~ 9055055 (-) False gmpr
XM_043217593.1 mRNA upstream 193018 9063758 ~ 9070995 (-) False LOC122323620
XM_043217592.1 mRNA upstream 193018 9063758 ~ 9067428 (-) True LOC122323620
XR_006247085.1 other downstream 66085 8751369 ~ 8757673 (-) False hey1
XR_006247069.1 other downstream 84972 8727259 ~ 8738786 (-) False si:dkeyp-120h9.1
XR_006247071.1 other downstream 502857 8289588 ~ 8320901 (-) False trit1
TU194205 other downstream 502873 8287294 ~ 8320885 (-) False trit1
XR_006247051.1 other downstream 694500 8121512 ~ 8129258 (-) False khdrbs1b
TU194713 other upstream 437980 9308720 ~ 9309352 (-) True G131861
XR_006246990.1 other upstream 789155 9659895 ~ 9664459 (-) True cibar1
TU195128 other upstream 1437218 10307958 ~ 10311928 (-) False elp2
TU195129 other upstream 1437218 10307958 ~ 10310675 (-) False elp2
TU195233 other upstream 2299530 11170270 ~ 11170913 (-) True G132219

Expression Profile