Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043218498.1 |
| length | 1423 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 10 |
| gene id | mrpl3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056717.1 |
| NCBI id | CM032086.1 |
| chromosome length | 20532727 |
| location | 15534897 ~ 15541499 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02906 | RP-L3, MRPL3, rplC; large subunit ribosomal protein L3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196784 | lncRNA | upstream | 51380 | 15481998 ~ 15483517 (+) | True | G133256 |
| TU196781 | lncRNA | upstream | 74191 | 15460338 ~ 15460706 (+) | True | G133253 |
| TU196629 | lncRNA | upstream | 156878 | 15374500 ~ 15378019 (+) | True | G133129 |
| TU196618 | lncRNA | upstream | 222065 | 15309668 ~ 15312832 (+) | False | LOC122323314 |
| TU196596 | lncRNA | upstream | 253893 | 15196057 ~ 15281004 (+) | True | G133109 |
| TU196793 | lncRNA | downstream | 7345 | 15548844 ~ 15549137 (+) | True | G133265 |
| TU196807 | lncRNA | downstream | 41706 | 15583205 ~ 15606585 (+) | True | G133276 |
| TU196821 | lncRNA | downstream | 83841 | 15625340 ~ 15626146 (+) | False | aste1b |
| TU196801 | lncRNA | downstream | 122097 | 15663596 ~ 15664196 (+) | True | G133270 |
| TU196978 | lncRNA | downstream | 222451 | 15763950 ~ 15764619 (+) | True | G133394 |
| XM_043217573.1 | mRNA | upstream | 2337 | 15509537 ~ 15532560 (+) | True | cpne4b |
| XM_043217264.1 | mRNA | upstream | 37420 | 15495505 ~ 15497477 (+) | True | LOC122323444 |
| XM_043217263.1 | mRNA | upstream | 39531 | 15492360 ~ 15495366 (+) | True | cmtm8a |
| XM_043217790.1 | mRNA | upstream | 53697 | 15469584 ~ 15481200 (+) | True | LOC122323726 |
| XM_043217789.1 | mRNA | upstream | 53697 | 15469584 ~ 15481200 (+) | False | LOC122323726 |
| XM_043217368.1 | mRNA | downstream | 7729 | 15549228 ~ 15557830 (+) | True | ptpn23b |
| XM_043217335.1 | mRNA | downstream | 69942 | 15611441 ~ 15619642 (+) | True | LOC122323476 |
| XM_043217336.1 | mRNA | downstream | 69942 | 15611441 ~ 15619642 (+) | False | LOC122323476 |
| XM_043218493.1 | mRNA | downstream | 78760 | 15620259 ~ 15626187 (+) | True | aste1b |
| XM_043218227.1 | mRNA | downstream | 85648 | 15627147 ~ 15636732 (+) | True | wu:fc38h03 |
| TU196767 | other | upstream | 110405 | 15421135 ~ 15424492 (+) | True | cckb |
| unassigned_transcript_2195 | other | upstream | 155356 | 15379470 ~ 15379541 (+) | True | trnap-agg_21 |
| TU196623 | other | upstream | 173052 | 15356740 ~ 15361845 (+) | True | anxa14 |
| TU196586 | other | upstream | 347058 | 15149304 ~ 15187839 (+) | False | LOC122323518 |
| TU196550 | other | upstream | 696945 | 14834637 ~ 14837952 (+) | False | LOC122323257 |
| TU196794 | other | downstream | 28165 | 15569664 ~ 15577981 (+) | True | G133266 |
| TU196987 | other | downstream | 233758 | 15775257 ~ 15776674 (+) | False | hoxa5a |
| TU197370 | other | downstream | 1144626 | 16686125 ~ 16692945 (+) | True | G133626 |
| unassigned_transcript_2198 | other | downstream | 1342580 | 16884079 ~ 16885971 (+) | True | LOC122323322 |
| unassigned_transcript_2201 | other | downstream | 1354373 | 16895872 ~ 16900069 (+) | True | LOC122324116 |
