RNA id: XR_006247129.1



Basic Information


Item Value
RNA id XR_006247129.1
length 138
RNA type snoRNA
GC content 0.51
exon number 1
gene id LOC122324259
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 2319236 ~ 2319373 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGCGGCCCTGATCGAAGCCGTTCCGTTTCTCTGTAACGGCAGCGGGTCAAACAGGAGCCTAAAGAAACACTTTACCGACGGTCGCTGTacagttccttttttttctgtcccaGCAACATTTAAGGGTAAAGGACAACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191830 lncRNA downstream 6781 2311285 ~ 2312455 (-) True G129920
TU191808 lncRNA downstream 178262 2139878 ~ 2140974 (-) True G129902
XR_006247054.1 lncRNA downstream 190124 2122686 ~ 2129112 (-) True LOC122323752
TU191783 lncRNA downstream 216132 2102703 ~ 2103104 (-) True G129889
TU191781 lncRNA downstream 236494 2082234 ~ 2082742 (-) True G129887
TU191851 lncRNA upstream 24879 2344252 ~ 2344505 (-) True G129938
TU191856 lncRNA upstream 31905 2351278 ~ 2351489 (-) True G129943
TU191910 lncRNA upstream 434043 2753416 ~ 2753740 (-) True G129987
TU191923 lncRNA upstream 467830 2787203 ~ 2803604 (-) True G129998
TU191926 lncRNA upstream 540487 2859860 ~ 2860077 (-) True G130001
XM_043217738.1 mRNA downstream 60802 2253838 ~ 2258434 (-) True cited4a
XM_043218164.1 mRNA downstream 257511 2060114 ~ 2061725 (-) True LOC122324005
XM_043217488.1 mRNA downstream 314202 1991179 ~ 2005034 (-) True ube2e1
XM_043217490.1 mRNA downstream 332047 1983801 ~ 1987189 (-) True rpl15
XM_043217708.1 mRNA downstream 340898 1970767 ~ 1978338 (-) False nr1d2b
XM_043217017.1 mRNA upstream 414363 2733736 ~ 2736130 (-) True stmn1a
XM_043217207.1 mRNA upstream 423213 2742586 ~ 2751533 (-) False LOC122323398
XM_043217009.1 mRNA upstream 557551 2876924 ~ 2884651 (-) True maneal
XM_043217092.1 mRNA upstream 684619 3003992 ~ 3022358 (-) True oprd1a
XM_043217090.1 mRNA upstream 994016 3313389 ~ 3323828 (-) True LOC122323345
XR_006247128.1 other downstream 188 2318972 ~ 2319048 (-) True LOC122324258
XR_006247127.1 other downstream 639 2318527 ~ 2318597 (-) True LOC122324257
TU191589 other downstream 819830 1498688 ~ 1499406 (-) True G129738
TU191574 other downstream 1032596 1283887 ~ 1286640 (-) False pef1
TU191551 other downstream 1038774 1278912 ~ 1280462 (-) False smim12
TU191907 other upstream 420631 2740004 ~ 2751570 (-) True LOC122323398
TU191925 other upstream 505971 2825344 ~ 2832956 (-) True G130000
TU191990 other upstream 589116 2908489 ~ 2911603 (-) True G130041
TU192049 other upstream 829781 3149154 ~ 3149789 (-) True G130083
TU192945 other upstream 2488724 4808097 ~ 4941832 (-) True G130696

Expression Profile