RNA id: unassigned_transcript_2196



Basic Information


Item Value
RNA id unassigned_transcript_2196
length 72
RNA type tRNA
GC content 0.61
exon number 1
gene id trnap-agg_22
representative True

Chromosome Information


Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 15385195 ~ 15385266 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU196750 lncRNA downstream 1080 15383847 ~ 15384115 (-) True G133226
TU196707 lncRNA downstream 107792 15190805 ~ 15277403 (-) True G133190
TU196647 lncRNA downstream 547242 14836460 ~ 14837953 (-) True G133143
TU196648 lncRNA downstream 549334 14835452 ~ 14835861 (-) True G133144
TU196470 lncRNA downstream 956373 14403518 ~ 14428822 (-) True G133016
TU196857 lncRNA upstream 28709 15413975 ~ 15424498 (-) True G133313
TU196859 lncRNA upstream 95066 15480332 ~ 15481202 (-) True G133315
TU196938 lncRNA upstream 240059 15625325 ~ 15626141 (-) False G133361
TU196939 lncRNA upstream 240059 15625325 ~ 15626280 (-) True G133361
TU196952 lncRNA upstream 286916 15672182 ~ 15673003 (-) True G133370
XM_043218318.1 mRNA downstream 6533 15376637 ~ 15378662 (-) True rpl14
XM_043218334.1 mRNA downstream 22377 15360926 ~ 15362818 (-) True LOC122324119
XM_043217396.1 mRNA downstream 92594 15280429 ~ 15292601 (-) True LOC122323517
XM_043217165.1 mRNA downstream 426695 14956900 ~ 14958500 (-) True c19h1orf109
XM_043217480.1 mRNA downstream 450479 14925718 ~ 14934716 (-) False LOC122323565
XM_043218424.1 mRNA upstream 40935 15426201 ~ 15439451 (-) True trak1b
XM_043218423.1 mRNA upstream 40935 15426201 ~ 15436345 (-) False trak1b
XM_043218422.1 mRNA upstream 54089 15439355 ~ 15454526 (-) True LOC122324175
XM_043218421.1 mRNA upstream 54090 15439356 ~ 15454526 (-) False LOC122324175
XM_043217575.1 mRNA upstream 112331 15497597 ~ 15509297 (-) False dync1li1
TU196741 other downstream 15459 15366434 ~ 15369736 (-) True G133217
TU196661 other downstream 493299 14891427 ~ 14891896 (-) False zgc:114119
TU196632 other downstream 600772 14784188 ~ 14784423 (-) True G133132
TU196169 other downstream 1876742 13507664 ~ 13508453 (-) True G132785
TU196161 other downstream 1882952 13501119 ~ 13502243 (-) False G132784
TU196948 other upstream 259596 15644862 ~ 15648579 (-) True LOC122323308
TU196955 other upstream 274653 15659919 ~ 15660720 (-) True G133373
TU197117 other upstream 536957 15922223 ~ 15924285 (-) True npy
TU197532 other upstream 895691 16280957 ~ 16508560 (-) False mbpa
TU197530 other upstream 966603 16351869 ~ 16508560 (-) True mbpa