RNA id: TU199505



Basic Information


Item Value
RNA id TU199505
length 338
lncRNA type read_through
GC content 0.41
exon number 2
gene id G135012
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 287326 ~ 333444 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTCCAGTGTGTTGTCGTCTGCAGATTCATACAGtaaactgcttttatttactAGAAACAAGTTTATTCTAGTCAGTTTTATATGTTCTGGCGATTGTTAACAGCTGGTGGACATCTCAGTCAGGATTGCCATCAGACTGCTACCAGGGAACTTGGGGTCAAGAATGAGGTCGTGAAGAAGGCCTTGACCTTTCTCCCGAGCCTGAGGTGAACACATAGCACTCCTCCACAGATTCACGAGGGAACCACCtgtgaataaatacatagaaGCATTGAAAAAGTTAAATAACCTGAACtgagatgttttcattcatattggttaacaatgcaaaataattg

Function


GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU199499 lncRNA downstream 767 282902 ~ 286559 (-) True G135010
TU199539 lncRNA upstream 200171 533615 ~ 604306 (-) True G135035
TU199540 lncRNA upstream 271790 605234 ~ 606164 (-) True G135036
TU199573 lncRNA upstream 277298 610742 ~ 611218 (-) True G135067
TU199578 lncRNA upstream 310440 643884 ~ 647196 (-) False tmem244
TU199721 lncRNA upstream 367095 700539 ~ 709031 (-) True G135185
XM_043220066.1 mRNA upstream 118433 451877 ~ 458866 (-) True si:dkey-126h10.1
XM_043218892.1 mRNA upstream 280231 613675 ~ 638556 (-) True arhgap18
XM_043218893.1 mRNA upstream 280231 613675 ~ 638555 (-) False arhgap18
XM_043218896.1 mRNA upstream 280231 613675 ~ 638500 (-) False arhgap18
XM_043218895.1 mRNA upstream 280231 613675 ~ 637915 (-) False arhgap18
XR_006247189.1 other upstream 420123 753567 ~ 822458 (-) False epb41l2
TU199809 other upstream 604721 938165 ~ 940175 (-) True G135237
TU199808 other upstream 605729 939173 ~ 940175 (-) False G135237
TU199811 other upstream 605729 939173 ~ 965395 (-) False G135237
TU199861 other upstream 769261 1102705 ~ 1103113 (-) True G135276

Expression Profile