RNA id: TU199540


Basic Information

Item Value
RNA id TU199540
length 931
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G135036
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 605234 ~ 606164 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctactattcaataaaatgaatgcaataccatgtgtactgtatatcttataaatacttatcaaataaaagaatacaatattctgtgtggtctcttcttcttgataaatctgtaacacatcacaatgtgttcgcaatacaaggtatcactcaaataaacaaggcaaacttacaaaattgggaaaacttccTGCTTTCCTCAACACTGTGCATTCATCCAATTTTTCCTGAGGTTCCACAGATGGCGACAAGTCAGCTGGCAATGGTTCGGGTGTCACCGGGAGTGCTGCTCACTTGTCTGAAGGTTATCTGGCTCTAATCTGTGGCGTACTGGATGAAACTCCAGAGACAAGACACCAGTGGTGGTGGAGATAAAACAACGGCCTCCTGGGGGTGCTGGGAAGGAATATTTATTCTCTGTTGAAATTGCATGCACCCCTCCCAAGGGGGAAACACCCCCTCTGTCCTGGGTGCACCTTAGGACTACTTCTTTGCGGAGATGATGGTCCGCAGGTCCGGTCTATTTGTGGTGAACTGTGAAGCACGGCAAGCAGGAGCTTGACTCGCCACACTCTCTTTCTGCGATTCACGCCTCAAAGTGACCCGACCTGTTCGGGACTGGGTGGCCAACAGTCACGAATCTTGAGCACGGCAGGGAAGAAACCTCACAAACTCTTCCTAATAGTGTTTCCCCTCCCGGAACCTAGTGGCGATGATAACTGTGTCGCCAAATAGGCTGGAAGGCGAGATGGGGGCATCAAGGTGGAAGGTACGATCCCACTCCTTGATGTCTCTGAGGTTGAGACACAGGTGTCTCTCCGTGGAAACCATGGAAGCCATTTTGGCCAATGGCACGGTCCGTCTGCTTGGTTGCACAGAAAGACAAGTCTGTGGCTTGGAGCAGCTATAAAAACGCCTCATCGAAGTCCTTTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU199539 lncRNA downstream 928 533615 ~ 604306 (-) True G135035
TU199505 lncRNA downstream 271790 287326 ~ 333444 (-) True G135012
TU199499 lncRNA downstream 318675 282902 ~ 286559 (-) True G135010
TU199573 lncRNA upstream 4578 610742 ~ 611218 (-) True G135067
TU199578 lncRNA upstream 37720 643884 ~ 647196 (-) False tmem244
TU199721 lncRNA upstream 94375 700539 ~ 709031 (-) True G135185
TU199736 lncRNA upstream 125722 731886 ~ 732431 (-) True G135195
TU199753 lncRNA upstream 158580 764744 ~ 765234 (-) True G135202
XM_043220066.1 mRNA downstream 146368 451877 ~ 458866 (-) True si:dkey-126h10.1
XM_043218942.1 mRNA downstream 176346 295938 ~ 428888 (-) False ptprk
XM_043218892.1 mRNA upstream 7511 613675 ~ 638556 (-) True arhgap18
XM_043218893.1 mRNA upstream 7511 613675 ~ 638555 (-) False arhgap18
XM_043218896.1 mRNA upstream 7511 613675 ~ 638500 (-) False arhgap18
XM_043218895.1 mRNA upstream 7511 613675 ~ 637915 (-) False arhgap18
XM_043219725.1 mRNA upstream 37407 643571 ~ 650357 (-) True tmem244
XR_006247189.1 other upstream 147403 753567 ~ 822458 (-) False epb41l2
TU199809 other upstream 332001 938165 ~ 940175 (-) True G135237
TU199808 other upstream 333009 939173 ~ 940175 (-) False G135237
TU199811 other upstream 333009 939173 ~ 965395 (-) False G135237
TU199861 other upstream 496541 1102705 ~ 1103113 (-) True G135276

Expression Profile