RNA id: TU201914



Basic Information


Item Value
RNA id TU201914
length 441
lncRNA type read_through
GC content 0.43
exon number 2
gene id G136696
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7152468 ~ 7251872 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAAGCTGATATTTCCATTCCAGAGAACCGGTGCTATGCGGACTGGATAAAGATCTGCTAAACACCCTGGGGTGCTGACGTGGCACTTTTAGAGGCTTGAATTCATTTTGATAAAGCTGTAGCAAAGGTTTTGATGAATTCTGATTGTACCTCAACTGTCTGCTCAAAGGTCCAGTCGagtttctttttcacttttttctccAGAAAGCTTGTAGCCTCTGTCTGCTTGACACCTGCAGCCGTGGCCTTGAAGCCACAGTAATAACCCGCCGGGTCACACTTATACACCTGTGGCCCGAGCTCCTCATCTACACCAATCACAATCATGCCTGAAAAAGACAACGCATGAAAGCTACTTTGCATATTGGTTGTTTGTGTAAAACGTGCTGTGCAATgctgaaactaaataaataaataaataaataaaattaacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201911 lncRNA downstream 714 7151390 ~ 7151754 (-) True G136694
TU201909 lncRNA downstream 13177 7133748 ~ 7139291 (-) True LOC122324389
XR_006247160.1 lncRNA downstream 13686 7135774 ~ 7138782 (-) False LOC122324389
XR_006247161.1 lncRNA downstream 13688 7135774 ~ 7138780 (-) False LOC122324389
XR_006247165.1 lncRNA downstream 13693 7135774 ~ 7138775 (-) False LOC122324389
TU201950 lncRNA upstream 29500 7281372 ~ 7281804 (-) True G136716
TU201952 lncRNA upstream 108995 7360867 ~ 7396292 (-) False G136717
TU201951 lncRNA upstream 142154 7394026 ~ 7396292 (-) True G136717
TU201970 lncRNA upstream 234021 7485893 ~ 7487411 (-) True G136724
TU201983 lncRNA upstream 292484 7544356 ~ 7598714 (-) False LOC122324530
XM_043220372.1 mRNA downstream 27785 7121351 ~ 7124683 (-) False LOC122325354
XM_043220371.1 mRNA downstream 27785 7121351 ~ 7124683 (-) True LOC122325354
XM_043219858.1 mRNA downstream 443814 6673230 ~ 6708654 (-) True flrt2
XM_043219857.1 mRNA downstream 470730 6673230 ~ 6681738 (-) False flrt2
XM_043220304.1 mRNA downstream 682399 6467779 ~ 6470069 (-) True glrx5
XM_043220056.1 mRNA upstream 3627 7255499 ~ 7257574 (-) True LOC122325143
XM_043219601.1 mRNA upstream 56838 7308710 ~ 7313322 (-) True LOC122324872
XM_043219603.1 mRNA upstream 69784 7321656 ~ 7325677 (-) True LOC122324873
XM_043219604.1 mRNA upstream 83516 7335388 ~ 7340455 (-) True LOC122324874
XM_043219546.1 mRNA upstream 116439 7368311 ~ 7370195 (-) True nfkbiaa
TU201662 other downstream 700969 6432830 ~ 6451499 (-) False LOC122324366
TU201658 other downstream 738455 6412479 ~ 6414013 (-) False si:dkey-63b1.1
TU201577 other downstream 849492 6274754 ~ 6302976 (-) True G136460
XR_006247217.1 other downstream 1221346 5924475 ~ 5931122 (-) False zpax2
unassigned_transcript_2505 other downstream 1325737 5826620 ~ 5826731 (-) True trnal-caa_53
TU201939 other upstream 44989 7296861 ~ 7305724 (-) True G136707
TU201958 other upstream 84279 7336151 ~ 7340436 (-) False LOC122324874
TU201961 other upstream 84279 7336151 ~ 7339939 (-) False LOC122324874
TU201941 other upstream 174797 7426669 ~ 7429268 (-) False LOC122325546
TU201966 other upstream 181360 7433232 ~ 7436354 (-) False LOC122325222

Expression Profile