RNA id: TU201966



Basic Information


Item Value
RNA id TU201966
length 638
RNA type TUCP
GC content 0.57
exon number 2
gene id LOC122325222
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7432060 ~ 7436498 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAACGCATCATGATCCGACACAAACGGGACTTTCGGAGCACAACACTCGCTTCTGAGATCGAGGTCTCCGAGGCATCCGGACGCAGAGCTCCGAAGGGAAAAATGCATGCTCCACGATGAACTGGGATGTGGTGGTTCACCTTCCTGTGAAATAATAATGGCTTGCCGGGCTGGGTGCTGCTGCTCCAGCGTCGGTTCTCTAAACGAAGACAACGCCAGGTTTCTCATGCTGGCTCTGCTGATCATCATCTACCTGTTGTGCGGGGCGGCGGTGTTCTCGGCGCTCGAGCATCCGAAGGAGACGCTCGCCAAGGAGAGGTGGGCTCAGAGGGTCGAGCAGTTCGCCCGCAAGTACAACCTGAGCCGGGACGACCTCAAGAACTTCCTCAGGAGCTACGAGGAGGCCAATGTGGCGGGAATCCGCGTGGACGCCACCAGACCGAGGTGGGATTTCGCGGGAGCTTTTTATTTCGTCGGAACGGTCGTTTCAACCATCGGTTTCGGGATGACGACACCCGTCACTATCGCCGGGAAGATATTCCTGATCTTTTACGGGCTCATCGGCTGCGCTGCCACCATTTTGTTCTTCAACCTCTTCCTGGAGCGAGTCATCACGGTCATCGCCCTCGTGTTGAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201952 lncRNA downstream 36940 7360867 ~ 7396292 (-) False G136717
TU201951 lncRNA downstream 36940 7394026 ~ 7396292 (-) True G136717
TU201950 lncRNA downstream 151428 7281372 ~ 7281804 (-) True G136716
TU201914 lncRNA downstream 181360 7152468 ~ 7251872 (-) True G136696
TU201911 lncRNA downstream 281478 7151390 ~ 7151754 (-) True G136694
TU201970 lncRNA upstream 49539 7485893 ~ 7487411 (-) True G136724
TU201983 lncRNA upstream 108002 7544356 ~ 7598714 (-) False LOC122324530
TU202014 lncRNA upstream 144671 7581025 ~ 7652975 (-) True G136758
TU201981 lncRNA upstream 154232 7590586 ~ 7601542 (-) True LOC122324530
TU202029 lncRNA upstream 233226 7669580 ~ 7771831 (-) True G136772
XM_043220585.1 mRNA downstream 3950 7424836 ~ 7429282 (-) True LOC122325546
XM_043219546.1 mRNA downstream 63037 7368311 ~ 7370195 (-) True nfkbiaa
XM_043219604.1 mRNA downstream 92777 7335388 ~ 7340455 (-) True LOC122324874
XM_043219603.1 mRNA downstream 107555 7321656 ~ 7325677 (-) True LOC122324873
XM_043219601.1 mRNA downstream 119910 7308710 ~ 7313322 (-) True LOC122324872
XM_043219037.1 mRNA upstream 157907 7594261 ~ 7601602 (-) False LOC122324530
XM_043219038.1 mRNA upstream 171778 7608132 ~ 7620574 (-) True LOC122324531
XM_043219292.1 mRNA upstream 349248 7785602 ~ 7799589 (-) True zyg11
XM_043219291.1 mRNA upstream 349248 7785602 ~ 7799589 (-) False zyg11
XM_043219131.1 mRNA upstream 420668 7857022 ~ 7874571 (-) True angptl1a
TU201941 other downstream 3964 7426669 ~ 7429268 (-) False LOC122325546
TU201958 other downstream 92796 7336151 ~ 7340436 (-) False LOC122324874
TU201961 other downstream 93293 7336151 ~ 7339939 (-) False LOC122324874
TU201939 other downstream 127508 7296861 ~ 7305724 (-) True G136707
TU201897 other downstream 204269 7125748 ~ 7228963 (-) True G136688
XR_006247310.1 other upstream 103771 7540125 ~ 7540240 (-) True LOC122325568
XR_006247193.1 other upstream 154224 7590578 ~ 7601602 (-) False LOC122324530
TU202009 other upstream 257601 7693955 ~ 7696065 (-) True G136754
TU202297 other upstream 886759 8323113 ~ 8644759 (-) False pigc
TU202296 other upstream 895413 8331767 ~ 8644759 (-) False pigc

Expression Profile