RNA id: TU202009



Basic Information


Item Value
RNA id TU202009
length 612
RNA type TUCP
GC content 0.54
exon number 3
gene id G136754
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7693955 ~ 7696065 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTGTTTACTTGTCAAGACGTCGCTGCCGTTTCCTCCCGTTATAAAAACCCGTCAAAATGCCTGACAGCTCGTAGTGATCGGAGCACGTACGAACTGTCCGGTAGAAGAAATCCTCTAAACAACAATGCGGACGAGGAACAGAGGTTACAGTGGATTTATAGCGGCCCGTGTTCCTTTAAACACCGTCAAGTAGGATCTGCCGATGCTTGAAGACAGATGTTTGACGGCTGACGAGCTAAGGAGCTAAGAGCGTTTCAATCGGATTGTACCTATTTGATCTACACCTCAACCCACCTGCCATTATCCGCGGCATACAAGCGTCTCTTTCGCTGTGAGGCCGTTATGATCCATCTCTTCGAGACCATGgaCGAGGCTTCCCCGCCGTCTCTGACCGATCTGTGCATGACTCTGGTGAGCTCCAGGCTGGAGCTCTTCTGTGAGATGCGTGATGACGGCTCCCTCTCCTTCCGCGAGCCGCTGGTCTTCCCGCAGGAGCTGGCCGACCAACTGCTCTGCAAGATGGCCACTGAGGGCCTGTTGAATGACAGCACGGTGGGAATCTTCCGAAGCTGCCAGCAGTTCCGGTTGCGTCACGCCTGCATCCGCACCGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202035 lncRNA downstream 16912 7675943 ~ 7677043 (-) True G136774
TU202014 lncRNA downstream 40980 7581025 ~ 7652975 (-) True G136758
TU201981 lncRNA downstream 92413 7590586 ~ 7601542 (-) True LOC122324530
TU201983 lncRNA downstream 95241 7544356 ~ 7598714 (-) False LOC122324530
TU201970 lncRNA downstream 206544 7485893 ~ 7487411 (-) True G136724
TU202030 lncRNA upstream 74862 7770927 ~ 7771831 (-) False G136772
TU202004 lncRNA upstream 89540 7785605 ~ 7788841 (-) False zyg11
TU202062 lncRNA upstream 194193 7890258 ~ 7893325 (-) True G136792
TU202090 lncRNA upstream 216083 7912148 ~ 7912564 (-) True G136804
XR_006247275.1 lncRNA upstream 457600 8153665 ~ 8182659 (-) False LOC122325257
XM_043219038.1 mRNA downstream 73381 7608132 ~ 7620574 (-) True LOC122324531
XM_043219037.1 mRNA downstream 92353 7594261 ~ 7601602 (-) False LOC122324530
XM_043220186.1 mRNA downstream 257457 7432060 ~ 7436498 (-) True LOC122325222
XM_043220585.1 mRNA downstream 264673 7424836 ~ 7429282 (-) True LOC122325546
XM_043219546.1 mRNA downstream 323760 7368311 ~ 7370195 (-) True nfkbiaa
XM_043219292.1 mRNA upstream 89537 7785602 ~ 7799589 (-) True zyg11
XM_043219291.1 mRNA upstream 89537 7785602 ~ 7799589 (-) False zyg11
XM_043219131.1 mRNA upstream 160957 7857022 ~ 7874571 (-) True angptl1a
XM_043219114.1 mRNA upstream 284614 7980679 ~ 7983050 (-) True faslg
XM_043219116.1 mRNA upstream 289826 7985891 ~ 7992309 (-) False si:dkey-86e18.1
XR_006247193.1 other downstream 92353 7590578 ~ 7601602 (-) False LOC122324530
XR_006247310.1 other downstream 153715 7540125 ~ 7540240 (-) True LOC122325568
TU201966 other downstream 257601 7433232 ~ 7436354 (-) False LOC122325222
TU201941 other downstream 264687 7426669 ~ 7429268 (-) False LOC122325546
TU201958 other downstream 353519 7336151 ~ 7340436 (-) False LOC122324874
TU202297 other upstream 627048 8323113 ~ 8644759 (-) False pigc
TU202296 other upstream 635702 8331767 ~ 8644759 (-) False pigc
TU202293 other upstream 685429 8381494 ~ 8644759 (-) True pigc
TU202479 other upstream 1122789 8818854 ~ 8819327 (-) True G137054
TU202481 other upstream 1125089 8821154 ~ 8821719 (-) True G137056

Expression Profile