RNA id: TU202030



Basic Information


Item Value
RNA id TU202030
length 768
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G136772
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7669580 ~ 7771831 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tgtctgtctgtctgtctgtctgtgtgtctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtggtttggtgGGGACTCGTGTCACTGAGGTCCCCATAGGTACaaaagcttataaatcatatatgTAACCAGGGTAGGATTcacctgttattttattttatatccctgGCAATGCACCTTTGATTTCCTATCACGTGGTTATGTGCGCTGTCCCCTTTAAGAAATAAGCGTTCACGCACATGTGAGAGCGAAGTGCACGTAGACAGACGGAGAACCGAGTTAAAGCGTTGCACAAAGAAATAGtttataaaactgttaaaaggaGATAAATCCCAGTTTATATCTACTCGTGAATGTGTGGGTACATGGTTTCATTTGACGATTACAAAGGAGTTGCCTTATTGCACGTGAGAGATCGCCAGTGGGGAAGGAAATTCGGACCACGTTAATGGAGATCGAGCGTGAGTTACTATAAAATGTCCCAAgaattaaagtgttaaataatgtaaagtatgttattatatgtttacCGAGCAGTAATTCTTATACTTTACTGTGTTAGAGGAGAGCAACGGAAATGTGAGATCGAGTGTTAATGACCATGTGAGCTTTTGCTGTGTGCTTCGTGGAATCAGTCGGAgagAGCACATATAGGCCACTGCCGTTGTTTTGTACGCCGTTGTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202035 lncRNA downstream 93884 7675943 ~ 7677043 (-) True G136774
TU202014 lncRNA downstream 117952 7581025 ~ 7652975 (-) True G136758
TU201981 lncRNA downstream 169385 7590586 ~ 7601542 (-) True LOC122324530
TU201983 lncRNA downstream 172213 7544356 ~ 7598714 (-) False LOC122324530
TU201970 lncRNA downstream 283516 7485893 ~ 7487411 (-) True G136724
TU202004 lncRNA upstream 13774 7785605 ~ 7788841 (-) False zyg11
TU202062 lncRNA upstream 118427 7890258 ~ 7893325 (-) True G136792
TU202090 lncRNA upstream 140317 7912148 ~ 7912564 (-) True G136804
XR_006247275.1 lncRNA upstream 381834 8153665 ~ 8182659 (-) False LOC122325257
XR_006247276.1 lncRNA upstream 381834 8153665 ~ 8182659 (-) True LOC122325257
XM_043219038.1 mRNA downstream 150353 7608132 ~ 7620574 (-) True LOC122324531
XM_043219037.1 mRNA downstream 169325 7594261 ~ 7601602 (-) False LOC122324530
XM_043220186.1 mRNA downstream 334429 7432060 ~ 7436498 (-) True LOC122325222
XM_043220585.1 mRNA downstream 341645 7424836 ~ 7429282 (-) True LOC122325546
XM_043219546.1 mRNA downstream 400732 7368311 ~ 7370195 (-) True nfkbiaa
XM_043219292.1 mRNA upstream 13771 7785602 ~ 7799589 (-) True zyg11
XM_043219291.1 mRNA upstream 13771 7785602 ~ 7799589 (-) False zyg11
XM_043219131.1 mRNA upstream 85191 7857022 ~ 7874571 (-) True angptl1a
XM_043219114.1 mRNA upstream 208848 7980679 ~ 7983050 (-) True faslg
XM_043219116.1 mRNA upstream 214060 7985891 ~ 7992309 (-) False si:dkey-86e18.1
TU202009 other downstream 74862 7693955 ~ 7696065 (-) True G136754
XR_006247193.1 other downstream 169325 7590578 ~ 7601602 (-) False LOC122324530
XR_006247310.1 other downstream 230687 7540125 ~ 7540240 (-) True LOC122325568
TU201966 other downstream 334573 7433232 ~ 7436354 (-) False LOC122325222
TU201941 other downstream 341659 7426669 ~ 7429268 (-) False LOC122325546
TU202297 other upstream 551282 8323113 ~ 8644759 (-) False pigc
TU202296 other upstream 559936 8331767 ~ 8644759 (-) False pigc
TU202293 other upstream 609663 8381494 ~ 8644759 (-) True pigc
TU202479 other upstream 1047023 8818854 ~ 8819327 (-) True G137054
TU202481 other upstream 1049323 8821154 ~ 8821719 (-) True G137056

Expression Profile