RNA id: TU203250



Basic Information


Item Value
RNA id TU203250
length 411
RNA type TUCP
GC content 0.51
exon number 2
gene id LOC122325476
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 11141945 ~ 11182183 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGAAGTTCGAAACCTGTCAACAAATAGAGGAGGTATCTTTCGAAAGCAGTGACCCAAAGTTCAGCATTCGGCGGGATGGCTCTCTTTACGCAGGGCAACATGTGACGAATCTAACTGAACCTATCCAGTTCATGGTGACAGCCAGAGACAGAGCGGGCAACTATATCTGGGAGACCACTGTTAAACTGGCCCTCGCTGGACACCTGCTATCACCTCCCGTTAACCAGTTTGCTGGGGATGGTATTTATGGCGGATCCTCCCACAACCACTATCAAAATCCCAGACTCATTACGTTTCCACGACAACACCAGCGAGGCTCGTCCAATGGACTGCGGCGACAGAAGCGAGACTGGGTCATTCCACCAATCAACGTGCCTGAAAACTCCAGAGGACCCTTCCCTCAAGTTCTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247254.1 lncRNA downstream 60269 11113796 ~ 11114925 (-) True LOC122325111
TU203241 lncRNA downstream 60361 11113891 ~ 11114833 (-) False LOC122325111
XR_006247258.1 lncRNA downstream 237820 10934946 ~ 10937374 (-) True LOC122325152
XR_006247259.1 lncRNA downstream 237844 10934946 ~ 10937350 (-) False LOC122325152
TU203205 lncRNA downstream 368414 10806521 ~ 10806780 (-) True G137588
TU203252 lncRNA upstream 9490 11191659 ~ 11194847 (-) True G137621
TU203293 lncRNA upstream 33057 11215226 ~ 11227365 (-) True G137644
TU203440 lncRNA upstream 429854 11612023 ~ 11613622 (-) True G137751
XR_006247149.1 lncRNA upstream 441424 11623593 ~ 11631094 (-) False LOC122324332
XR_006247148.1 lncRNA upstream 441424 11623593 ~ 11631094 (-) False LOC122324332
XM_043218785.1 mRNA downstream 38582 11131424 ~ 11136612 (-) True LOC122324412
XM_043218784.1 mRNA downstream 107788 11061914 ~ 11067406 (-) True si:ch211-142k18.1
XM_043219454.1 mRNA downstream 242879 10925463 ~ 10932315 (-) False eif2b4
XM_043219453.1 mRNA downstream 242879 10925463 ~ 10932315 (-) True eif2b4
XM_043219460.1 mRNA downstream 252315 10895988 ~ 10922879 (-) False snx17
XM_043220208.1 mRNA upstream 118975 11301144 ~ 11319919 (-) True kita
XM_043220053.1 mRNA upstream 157694 11339863 ~ 11360039 (-) True pdgfra
XM_043220026.1 mRNA upstream 184754 11366923 ~ 11368490 (-) True gsx2
XM_043220158.1 mRNA upstream 301968 11484137 ~ 11506327 (-) True fip1l1a
XM_043220584.1 mRNA upstream 422461 11604630 ~ 11607753 (-) True rasl11b
TU203246 other downstream 38606 11132626 ~ 11136588 (-) False LOC122324412
unassigned_transcript_2506 other downstream 242550 10932562 ~ 10932644 (-) True trnal-cag_34
TU203048 other downstream 451125 10721921 ~ 10724069 (-) True G137469
TU203003 other downstream 604457 10567297 ~ 10570737 (-) True G137451
TU202840 other downstream 1236317 9937965 ~ 9938877 (-) True G137330
XR_006247255.1 other upstream 184754 11366923 ~ 11368490 (-) False gsx2
XR_006247367.1 other upstream 446959 11629128 ~ 11629249 (-) True LOC122325628
XR_006247365.1 other upstream 447551 11629720 ~ 11629841 (-) True LOC122325626
XR_006247366.1 other upstream 448072 11630241 ~ 11630361 (-) True LOC122325627
TU203468 other upstream 500236 11682405 ~ 11683318 (-) True G137773