RNA id: TU203535


Basic Information

Item Value
RNA id TU203535
length 503
lncRNA type inter_gene
GC content 0.60
exon number 2
gene id G137831
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 11893267 ~ 11893889 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCGTTACCCTTGGGCAGCCCCAACGCGTTCATTGGTGGTGGAGGCGGAGGAGGGAAGTCTTGTGGCAAGCCAGCAGGAGAGGATAGAGCACTAGAGCTGAAAAAGGGCGGAGGGGGCGGTGGGAAAGAAGGCGAGCTGGGAGACTCCACGCTGCTTCCTTTGGTCAGTGACGCCTGCTGCTGGAAGAGCGGAAGGGTGACGCGGCTGAAGGGTTTGTGGGGCGTTGTGGGAGACAGAGGACTGGAGCTTGAGGAGGTCGAGGACTGCGTGCTGTATCCGATCGGCCCCCCGCTTGTTGTGGGACTCTGAGCAGCGATAAACTGCTTGGGCCGGGCATAGTTGAAGGTGCTTGTTTGCATGGTGCTACTCTCCAGCTCCTGGAAGGAGGGAGGAGGTGGGAGAGGAGGAGATGGAGGCGGGACTTCCTGAGGAGGGGGAAGCTGCTGTTGCTGCTCAAGAAGGATCTGATCTTGAAGTTGCTTCAGTTGTGCCGCGTTTCTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203525 lncRNA downstream 53901 11838470 ~ 11839366 (-) True G137822
TU203524 lncRNA downstream 56551 11836106 ~ 11836716 (-) True G137821
TU203482 lncRNA downstream 95316 11792550 ~ 11797951 (-) True G137784
TU203514 lncRNA downstream 121607 11771269 ~ 11771660 (-) True G137812
TU203474 lncRNA downstream 142095 11717238 ~ 11751172 (-) True G137779
TU203664 lncRNA upstream 51369 11945258 ~ 12013976 (-) True G137916
TU203678 lncRNA upstream 141589 12035478 ~ 12036122 (-) True G137930
TU203708 lncRNA upstream 159888 12053777 ~ 12194359 (-) True G137944
TU203682 lncRNA upstream 301640 12195529 ~ 12197425 (-) True G137932
TU203801 lncRNA upstream 979817 12873706 ~ 12881309 (-) True G138016
XM_043219021.1 mRNA downstream 59575 11824261 ~ 11833692 (-) True anapc4
XM_043219020.1 mRNA downstream 59575 11824448 ~ 11833692 (-) False anapc4
XM_043219024.1 mRNA downstream 70435 11804674 ~ 11822832 (-) False slain2
XM_043219029.1 mRNA upstream 13671 11907560 ~ 11910735 (-) True cbr4
XM_043220525.1 mRNA upstream 165786 12059675 ~ 12064023 (-) True LOC122325482
XM_043219074.1 mRNA upstream 284011 12177900 ~ 12181346 (-) False LOC122324547
XM_043219073.1 mRNA upstream 284011 12177900 ~ 12181346 (-) True LOC122324547
XM_043219075.1 mRNA upstream 287890 12181779 ~ 12185425 (-) True LOC122324548
TU203468 other downstream 209949 11682405 ~ 11683318 (-) True G137773
XR_006247366.1 other downstream 262906 11630241 ~ 11630361 (-) True LOC122325627
XR_006247365.1 other downstream 263426 11629720 ~ 11629841 (-) True LOC122325626
XR_006247367.1 other downstream 264018 11629128 ~ 11629249 (-) True LOC122325628
XR_006247255.1 other downstream 524777 11366923 ~ 11368490 (-) False gsx2
TU203734 other upstream 324874 12218763 ~ 12219639 (-) True G137967
TU203715 other upstream 328921 12222810 ~ 12224270 (-) True G137949
TU203701 other upstream 352333 12246222 ~ 12247010 (-) False mdn1
XR_006247291.1 other upstream 1531586 13425475 ~ 13436351 (-) False cracd
TU204189 other upstream 1770617 13664506 ~ 13692007 (-) True G138285

Expression Profile