RNA id: TU204189



Basic Information


Item Value
RNA id TU204189
length 474
RNA type TUCP
GC content 0.55
exon number 2
gene id G138285
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 13664506 ~ 13692007 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tacGCGGTAAATGATAAATGTGGTCGGGAGCAAACGCACACGTACCTTTCCTCCGCTCGAGCGTGTGGAGTTGGGCGAGTTGTTGTCTGTTACCGGGGGACTTGTCCGTTGGGCTCGCAGCTGCTCTGTTCCTCTCAAACGCAGCATTGGCGGCGATGGTCGTCGGTGTTTTCCGGTCGGGGCTGCAGTGGCCAAACACAGTAACTCCTCGTCCTCATCTTTTTGTCTGCCCTGTTGAGCAGACATGGTATGGCCCATGGGGTCCAGGTCATAGTCGTGGTCCCATTCCAGAGGGATGGAGTCTACACTGGCAGGGGTGTCCCGGCCAGAGCCATTTGTACAAACAGGAGCAGTCCCACCTGAAGATGGTCTGCTAGATGTCTGGGACAGGGTACCATCCTCACCCCACTGAAGGTCTGAGATGTCACCTGACTCAAATTCACGATCTGAGCCTTCAAACTCATCATCAATCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU204126 lncRNA downstream 115968 13547276 ~ 13548538 (-) False gtf2h5
TU204127 lncRNA downstream 115968 13547276 ~ 13548538 (-) True gtf2h5
TU204115 lncRNA downstream 149373 13514765 ~ 13515133 (-) True G138232
TU204100 lncRNA downstream 166480 13495682 ~ 13498026 (-) True G138221
TU204096 lncRNA downstream 185482 13478772 ~ 13479024 (-) True G138217
TU204217 lncRNA upstream 73424 13765431 ~ 13767824 (-) True stx11b.2
TU204248 lncRNA upstream 138570 13830577 ~ 13832060 (-) True G138335
TU204268 lncRNA upstream 157933 13849940 ~ 13850174 (-) True G138351
TU204354 lncRNA upstream 249221 13941228 ~ 13999349 (-) True G138399
TU204368 lncRNA upstream 253253 13945260 ~ 13945737 (-) True G138407
XM_043218696.1 mRNA downstream 105111 13555926 ~ 13559395 (-) True myct1a
XM_043219185.1 mRNA downstream 109081 13548658 ~ 13555425 (-) False serac1
XM_043219184.1 mRNA downstream 109081 13548658 ~ 13555425 (-) False serac1
XM_043219186.1 mRNA downstream 109085 13548658 ~ 13555421 (-) True serac1
XM_043219196.1 mRNA downstream 115915 13547281 ~ 13548591 (-) False gtf2h5
XM_043220437.1 mRNA upstream 8085 13700092 ~ 13732388 (-) True akap12b
XM_043220438.1 mRNA upstream 8085 13700092 ~ 13711664 (-) False akap12b
XM_043220389.1 mRNA upstream 43262 13735269 ~ 13761950 (-) False mthfd1l
XM_043220388.1 mRNA upstream 43262 13735269 ~ 13761950 (-) True mthfd1l
XM_043220361.1 mRNA upstream 71328 13763335 ~ 13765462 (-) False stx11b.2
XR_006247291.1 other downstream 228155 13425475 ~ 13436351 (-) False cracd
TU203701 other downstream 1417496 12246222 ~ 12247010 (-) False mdn1
TU203715 other downstream 1440236 12222810 ~ 12224270 (-) True G137949
TU203734 other downstream 1444867 12218763 ~ 12219639 (-) True G137967
TU203468 other downstream 1981188 11682405 ~ 11683318 (-) True G137773
TU204531 other upstream 751585 14443592 ~ 14445844 (-) False LOC122324589
TU204892 other upstream 1301092 14993099 ~ 15015183 (-) True srsf5b
TU204893 other upstream 1301092 14993099 ~ 15015183 (-) False srsf5b
XR_006247368.1 other upstream 1598268 15290275 ~ 15290410 (-) True LOC122325630
XR_006247360.1 other upstream 2030039 15722046 ~ 15722265 (-) True LOC122325621

Expression Profile