RNA id: TU206190


Basic Information

Item Value
RNA id TU206190
length 465
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id LOC122324448
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 17893736 ~ 17907615 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCTGAGGTGATGGGGCTGGGGGTGGGGCGAACGGGTCACAGCCTACGCACATCTGGAAGCACTTCAGGTCAGCAGGGCCCGGCTGCCTGAAAGaggaCACATCAGAGGTTTGAAGAATGAGCAGACGCGCTTGTGAAACATGGCTGGAGACAGAGCGGGAAGCCCAGATCTCGAAGCCTTGGCTGCAGCACCAGGCCTGGTGGAGGCACAGTGTCCGGTTACGCAGCGCCTGAGGAATGAGCTCAAAGTCTCTTTTATCAAAGCATTTCTGTATTGCTCCCTTTCTGGGACACATTAATTGCAGATGTGTTTGTTCTATTTCTTTCCTTTCGTTCTCCCCTTCCTTCTCTTGATCTATAAACGGGAATAATCCCCATCTTTCTACAAAAACAGTCTCATTACAGGAGAATGTGGAGACTGGCTGTGGCCTACAGCATGTGTGCTCAGAGGCAGAGTGATCGGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206130 lncRNA downstream 91806 17801402 ~ 17802196 (-) False swt1
TU206136 lncRNA downstream 94136 17795484 ~ 17799866 (-) False G139567
TU206185 lncRNA upstream 188590 18087212 ~ 18107403 (-) True G139591
TU206184 lncRNA upstream 208922 18107544 ~ 18180187 (-) True G139590
TU206266 lncRNA upstream 258179 18156801 ~ 18157647 (-) True G139651
TU206271 lncRNA upstream 267504 18166126 ~ 18166731 (-) True G139653
TU206313 lncRNA upstream 357236 18255858 ~ 18290820 (-) False G139681
XM_043220059.1 mRNA downstream 32971 17843539 ~ 17861031 (-) True kifap3a
XM_043219503.1 mRNA downstream 69801 17806129 ~ 17824201 (-) False swt1
XM_043219504.1 mRNA downstream 69801 17808201 ~ 17824201 (-) False swt1
XM_043219501.1 mRNA downstream 69802 17801666 ~ 17824200 (-) False swt1
XM_043218850.1 mRNA upstream 68474 17967096 ~ 17975299 (-) True slc25a24
XM_043220232.1 mRNA upstream 90690 17989312 ~ 17995262 (-) True si:ch211-63o20.7
XM_043220602.1 mRNA upstream 109324 18007946 ~ 18013527 (-) False znf395b
XM_043220604.1 mRNA upstream 109324 18007946 ~ 18013451 (-) False znf395b
XM_043220603.1 mRNA upstream 109324 18007946 ~ 18012436 (-) True znf395b
XR_006247229.1 other downstream 69801 17810274 ~ 17824201 (-) False swt1
TU205714 other downstream 465931 17346806 ~ 17428071 (-) True erh
TU205713 other downstream 465931 17425868 ~ 17428071 (-) False erh
TU205287 other downstream 1431786 16455468 ~ 16462216 (-) True G139030
TU205233 other downstream 1527230 16364810 ~ 16366772 (-) False fndc1
XR_006247304.1 other upstream 444850 18343472 ~ 18350122 (-) True adgrf3b
TU206351 other upstream 507405 18406027 ~ 18446949 (-) False G139706
TU206365 other upstream 508132 18406754 ~ 18442292 (-) True G139706
unassigned_transcript_2507 other upstream 1177424 19076046 ~ 19076118 (-) True trnaf-gaa_119
TU206720 other upstream 1356188 19254810 ~ 19256255 (-) False batf3

Expression Profile