RNA id: TU206365



Basic Information


Item Value
RNA id TU206365
length 756
RNA type TUCP
GC content 0.44
exon number 5
gene id G139706
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 18406027 ~ 18446949 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAGTGTGTGGGTTAAATGGAACAGAATATGAGTGCCAGTGTGAGCAGGATCATGTCTGGCCCAGTGACACCTGCAGAGCCTAtcaggtgtgtgatggcattgTGGGAGGCACTTGTGGATGTATTCAAGCTCTCCCTTCAGAGGGTCCACTTTGCCTGAAAGatatcAATGAATGTAAAGATGCAGTGTCAGTGTGTGGTCCATACTCAGATTGTATTAACTTCATTGGGAGTCACATGTGTTCATGCTGGAGTGGATTTAATACCTCCAATAAAGACAGTCCTGTGAGCCGTAACAACTCATGTCAGGatataaatgaatgtCTGTTCAGTTCACCTGTATGTGGTCCAAATTCCATCTGCACAAATCAGCTGGGAAGTTATAATTGTTCATGTCTGGATGGGTTCACTGCAACAAACTCACTTCTCCTCATCAGCAACAATAACACATGTAGAGATGTGAATGAATGTCTTCAGACGACGGAGGTCTGTGGTCCAAACTCTCGTTGCACAAACTTAATTGGGAGTTACAGCTGTTCCTGCTTGACTGGATATACAGTAACAAATAGCAGTGAACTAGTCAGGGCCAGGAACCCATGCAATGTGACTCTGCCTTTGACTGAGTATCTGATTGAAATTCAGATCAATAGCATGGACAGCAGAATGACTGATCAGCTGAGGAACATCCTGATGTATTTCAGTTTGCCCTACACAATCAGTGACAGCACTAACATCACAGAAATCAACATAACTACTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206343 lncRNA downstream 64424 18342047 ~ 18342330 (-) True G139704
TU206341 lncRNA downstream 65571 18340729 ~ 18341183 (-) True G139702
TU206340 lncRNA downstream 66510 18340029 ~ 18340244 (-) True G139701
TU206339 lncRNA downstream 67244 18339274 ~ 18339510 (-) True G139700
TU206317 lncRNA downstream 93149 18311356 ~ 18313605 (-) False G139681
XR_006247142.1 lncRNA upstream 7652 18449944 ~ 18452122 (-) False LOC122324299
XR_006247141.1 lncRNA upstream 7653 18449945 ~ 18452116 (-) True LOC122324299
TU206392 lncRNA upstream 7670 18449962 ~ 18452132 (-) False LOC122324299
TU206496 lncRNA upstream 156402 18598694 ~ 18598912 (-) True G139790
TU206504 lncRNA upstream 185015 18627307 ~ 18634666 (-) True G139798
XM_043220535.1 mRNA downstream 935 18401166 ~ 18405819 (-) True LOC122325497
XM_043218603.1 mRNA downstream 5564 18366767 ~ 18401190 (-) True adgrf6
XM_043218608.1 mRNA downstream 42893 18354170 ~ 18363861 (-) True LOC122324297
XM_043220580.1 mRNA downstream 56632 18343463 ~ 18350122 (-) False adgrf3b
XM_043219440.1 mRNA upstream 11416 18453708 ~ 18473259 (-) True tnfrsf21
XM_043220441.1 mRNA upstream 86146 18528438 ~ 18555294 (-) True ptchd4
XM_043220348.1 mRNA upstream 162359 18604651 ~ 18607543 (-) True LOC122325333
XM_043220151.1 mRNA upstream 219217 18661509 ~ 18669079 (-) True si:dkey-1j5.4
XM_043220539.1 mRNA upstream 228660 18670952 ~ 18679703 (-) True lbr
XR_006247304.1 other downstream 56632 18343472 ~ 18350122 (-) True adgrf3b
XR_006247229.1 other downstream 582553 17810274 ~ 17824201 (-) False swt1
TU205714 other downstream 978683 17346806 ~ 17428071 (-) True erh
TU205713 other downstream 978683 17425868 ~ 17428071 (-) False erh
TU205287 other downstream 1944538 16455468 ~ 16462216 (-) True G139030
unassigned_transcript_2507 other upstream 633754 19076046 ~ 19076118 (-) True trnaf-gaa_119
TU206720 other upstream 812518 19254810 ~ 19256255 (-) False batf3
TU206721 other upstream 819174 19261466 ~ 19262878 (-) True LOC122324949
TU206746 other upstream 858084 19300376 ~ 19302848 (-) False angel2
TU206747 other upstream 858084 19300376 ~ 19303968 (-) False angel2

Expression Profile