Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043218875.1 |
| length | 1141 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | batf3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 19254734 ~ 19256272 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K09034 | BATF; ATF-like basic leucine zipper transcriptional factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU206702 | lncRNA | downstream | 3944 | 19224380 ~ 19250790 (-) | True | G139940 |
| TU206658 | lncRNA | downstream | 94577 | 19159838 ~ 19160157 (-) | True | G139903 |
| TU206615 | lncRNA | downstream | 210820 | 19040790 ~ 19043914 (-) | True | G139871 |
| TU206550 | lncRNA | downstream | 424935 | 18824880 ~ 18829799 (-) | True | G139823 |
| TU206519 | lncRNA | downstream | 583801 | 18669438 ~ 18670933 (-) | True | G139801 |
| TU206741 | lncRNA | upstream | 41997 | 19298269 ~ 19300293 (-) | False | angel2 |
| TU206999 | lncRNA | upstream | 78807 | 19335079 ~ 19341060 (-) | True | G140152 |
| TU207027 | lncRNA | upstream | 189556 | 19445828 ~ 19448712 (-) | True | G140175 |
| TU207123 | lncRNA | upstream | 480668 | 19736940 ~ 19737992 (-) | False | G140240 |
| TU207125 | lncRNA | upstream | 480668 | 19736940 ~ 19737817 (-) | True | G140240 |
| XM_043219539.1 | mRNA | downstream | 21917 | 19179809 ~ 19232817 (-) | False | adat2 |
| XM_043219537.1 | mRNA | downstream | 21917 | 19199863 ~ 19232817 (-) | True | adat2 |
| XM_043219538.1 | mRNA | downstream | 21917 | 19220917 ~ 19232817 (-) | False | adat2 |
| XM_043220378.1 | mRNA | downstream | 88726 | 19096279 ~ 19166008 (-) | True | hivep2a |
| XM_043220376.1 | mRNA | downstream | 91947 | 19096279 ~ 19162787 (-) | False | hivep2a |
| XM_043219738.1 | mRNA | upstream | 416 | 19256688 ~ 19258698 (-) | True | nsl1 |
| XM_043219739.1 | mRNA | upstream | 6052 | 19262324 ~ 19262952 (-) | False | LOC122324949 |
| XM_043219807.1 | mRNA | upstream | 41962 | 19298234 ~ 19303812 (-) | True | angel2 |
| XM_043219776.1 | mRNA | upstream | 199532 | 19455804 ~ 19487350 (-) | True | itpkb |
| XM_043219777.1 | mRNA | upstream | 199532 | 19455804 ~ 19486264 (-) | False | itpkb |
| unassigned_transcript_2507 | other | downstream | 178616 | 19076046 ~ 19076118 (-) | True | trnaf-gaa_119 |
| TU206351 | other | downstream | 807785 | 18406027 ~ 18446949 (-) | False | G139706 |
| TU206365 | other | downstream | 812442 | 18406754 ~ 18442292 (-) | True | G139706 |
| XR_006247304.1 | other | downstream | 904612 | 18343472 ~ 18350122 (-) | True | adgrf3b |
| XR_006247229.1 | other | downstream | 1430533 | 17810274 ~ 17824201 (-) | False | swt1 |
| TU206721 | other | upstream | 5194 | 19261466 ~ 19262878 (-) | True | LOC122324949 |
| TU206746 | other | upstream | 44104 | 19300376 ~ 19302848 (-) | False | angel2 |
| TU206747 | other | upstream | 44104 | 19300376 ~ 19303968 (-) | False | angel2 |
| XR_006247245.1 | other | upstream | 345260 | 19601532 ~ 19615202 (-) | False | trim54 |
| TU207099 | other | upstream | 801352 | 20057624 ~ 20059603 (-) | True | G140227 |
