RNA id: TU206747


Basic Information

Item Value
RNA id TU206747
length 1558
RNA type TUCP
GC content 0.47
exon number 5
gene id angel2
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 19298234 ~ 19303968 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATTTGTCCCTGTAATaattaaggtttttttcttgatattataaaatatttaattagacatATACTGTTTGCATTACGAATTAGTTGcacaaattactaaaaaaaaaattactggaAAAGGCTAATCGTGCGTGACCAAAATCAGTGTATCGTCCAAAATTATGTCACAGTAACAGAGCACGAACTATCCACCATCCACAGACAGAGAAGACAGACATGCGCCAACTATCTGAGCATTTCAATGGGACATCGACAACAATCATTTAATATCTGGATCGAAAGTACCGCTTTGTATTTATCACGGATTCTCGGTCATCCCATGTTTGGCCGTTACCTGAGCACAGTGGGCTTTCCGCCAGCTCAGACTGTTTACTGCCACTGGAGACACTGGTATCAGCCTGGTCGTTTATGGTTGACGCCTCCATCCCACCTGCAGCATCCCTCGTCCTCCTTCAGCACTGTCAGACACCCCTCCAGTAGGCCCCCGAGACCTCCAAATCCGTACAGCTGGAGCTCCTGGACGAAAACTGGAATACTGCCACATACTCAACCCAGAAGAGACCTTCAGCTTTCTGCAGGTCTAATGGACCGCTCTAATAATGAGCCACCACAGAAAAGAAGGAAGAGCGCAGACGGGAGGCAAACAGGGGATAGATCTCAACGCTCGACCGAGCGATCACCTCCAAAGGGCAGCAGGAGTCTAAAAGGAAGTCCAGAATGGCTACGCAATGTAACCGGCACTCCGGTTCCTCCTGGAAAATTTCTGTCAAGCCCAAATAAGACTCTAGCCCAACCAGAATTGAAGAGGCACTGGGAGGATCTTTCTCGCCTCTGTAATGCTGCACCATCTGTGAATGGAATTAAAAGGCCATTTGACTTTTCTGTGATGTCCTACAATATCCTCTCACAAGATCTGCTCTGCGATAACACATACCTTTATAGACACTGTCATCCTCCAGCTCTGGATTGGCACCATAGGTATTCTAACATCATCAAAGAGCTTGAAAAGCACAGTGCTGATATAATGTGCCTGCAGGAGGTGCAAGAGGACCACTATAAGCAACAAATTAAACCCTCGCTAGAATCTTTAGGCTACCATTGTGAGTACAAACGGAGGACGGGACTGAAGCCTGACGGATGCGCGGTGGTCTTCAAACGCGAGCGCTTCTCTTTGGTCTCCTGTCACCCTGTGGAGTATTTCCGACGTGGCATCCCTCTACTGGACCGTGATAACGTGGGCCTGATTGTGCTGCTCCGGCCCGTTGACTCCCATAGCTCCCTCACCAACATCTGTGTGGCCAACACACATTTACTGTACAACCCTAGACGTGGGGACATTAAACTGGCCCAGCTGGCTATGCTGCTGGCAGAGATAAGCCGGGTGGCCCAGTTACCTGACAGCAGCAAATGTCCCGTGCTGCTCTGTGGAGATTTTAACTCTGTTCCCTGGTCTCCCTTATATCGCTTCATTAGGGACAGCAGACTGGAATATGATGATTTACCTATTGGAAAGGTAGAGAATCCTTCAGCATTTCCTCattctgatgttttttggaCTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206741 lncRNA downstream 83 19298269 ~ 19300293 (-) False angel2
TU206702 lncRNA downstream 49586 19224380 ~ 19250790 (-) True G139940
TU206658 lncRNA downstream 140219 19159838 ~ 19160157 (-) True G139903
TU206615 lncRNA downstream 256462 19040790 ~ 19043914 (-) True G139871
TU206550 lncRNA downstream 470577 18824880 ~ 18829799 (-) True G139823
TU206999 lncRNA upstream 31111 19335079 ~ 19341060 (-) True G140152
TU207027 lncRNA upstream 141860 19445828 ~ 19448712 (-) True G140175
TU207123 lncRNA upstream 432972 19736940 ~ 19737992 (-) False G140240
TU207125 lncRNA upstream 432972 19736940 ~ 19737817 (-) True G140240
TU207124 lncRNA upstream 435731 19739699 ~ 19740363 (-) False G140240
XM_043219739.1 mRNA downstream 37424 19262324 ~ 19262952 (-) False LOC122324949
XM_043219738.1 mRNA downstream 41678 19256688 ~ 19258698 (-) True nsl1
XM_043218875.1 mRNA downstream 44104 19254734 ~ 19256272 (-) True batf3
XM_043219537.1 mRNA downstream 67559 19199863 ~ 19232817 (-) True adat2
XM_043219776.1 mRNA upstream 151836 19455804 ~ 19487350 (-) True itpkb
XM_043219777.1 mRNA upstream 151836 19455804 ~ 19486264 (-) False itpkb
XM_043219789.1 mRNA upstream 210112 19514080 ~ 19516523 (-) True si:ch211-245h14.1
XM_043219788.1 mRNA upstream 210112 19514080 ~ 19516509 (-) False si:ch211-245h14.1
XM_043219790.1 mRNA upstream 210112 19514080 ~ 19516500 (-) False si:ch211-245h14.1
TU206721 other downstream 37498 19261466 ~ 19262878 (-) True LOC122324949
TU206720 other downstream 44121 19254810 ~ 19256255 (-) False batf3
unassigned_transcript_2507 other downstream 224258 19076046 ~ 19076118 (-) True trnaf-gaa_119
TU206351 other downstream 853427 18406027 ~ 18446949 (-) False G139706
XR_006247245.1 other upstream 297564 19601532 ~ 19615202 (-) False trim54
TU207099 other upstream 753656 20057624 ~ 20059603 (-) True G140227
TU207100 other upstream 753656 20057624 ~ 20058499 (-) False G140227
TU207179 other upstream 757634 20061602 ~ 20062977 (-) True G140277
TU207486 other upstream 1669436 20973404 ~ 20975750 (-) False crnkl1

Expression Profile