RNA id: TU207179



Basic Information


Item Value
RNA id TU207179
length 838
RNA type TUCP
GC content 0.47
exon number 5
gene id G140277
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20061602 ~ 20062977 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTGGTGTGGAGCTTACCAAACAAGGAGTGCTGGAAAAATACAAAGTGCGTGTGCTTGGAACCCCAGTGGCCTCCATAGAGAtgactgaagacagaaagatCTTTGTGGAGAAGATGGAGGAAATCAATGAGCATGTTGCCCCCAGTGAAGCAGCCATGTCTGTTGAACAGTGGCtgctgctgaaagactcggctaTCCCGTTCTGGTCCGGTCAGCTTTTGCTCTGGGTGGATTGGGTTCAGGCTTTGCAAATAACAGAGAGGAGATGATCACATTGGTCACCCAGGCCTTTGCACACACATCACAAGTTCTGGTTGACAAATCACTTAAAGGCTGGAAGGAAATAGAGTATGAAGTGGTGCGGGACGCCTATGACAACTGCATTACGGTTTGTAACATGGAGAACATTGATCCTTTAGGAATTCACACTGGGGAGTCCATAGTAGTGGCTCCTAGTCAGACACTGAATGACTATGAATACAATATGCTGAGAAACACTGCCATCAAAGTTATTCGCCACTTAAGCATTGTGGGAGAGTGCAACATTCAGTATGCTCTAAATCCTGAATCTGAGCAGTACTACATCATTGAAGTCAACGCACGTCTTTCACGAAGCTCTGCATTGGCTAGTAAGGCCACAGGTTATCCGCTGGCCTACGTGGCCGCTAAGCTTGGCATGGGAATCCCTCTGCCCATGCTCAAGAATTCGGTGACTAATTCCACAACAGCCAACTTTGAGCCCAGTCTGGATTACTGTGTGGTAAAGGTTCCTCGTTGGGATTTGAGCAAGTTCCTCAGAGTCAGCACTAAAATTGGCAGTTCAATGAAGAGTGTTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207161 lncRNA downstream 151955 19905631 ~ 19909647 (-) True G140265
TU207139 lncRNA downstream 259934 19800522 ~ 19801668 (-) True G140248
TU207134 lncRNA downstream 259934 19800665 ~ 19801668 (-) False G140248
TU207124 lncRNA downstream 321239 19739699 ~ 19740363 (-) False G140240
TU207125 lncRNA downstream 323785 19736940 ~ 19737817 (-) True G140240
TU207209 lncRNA upstream 85303 20148280 ~ 20167998 (-) True G140304
TU207223 lncRNA upstream 203691 20266668 ~ 20268266 (-) False G140315
TU207225 lncRNA upstream 203691 20266668 ~ 20268266 (-) False G140315
TU207226 lncRNA upstream 203691 20266668 ~ 20268266 (-) True G140315
TU207227 lncRNA upstream 203691 20266668 ~ 20268266 (-) False G140315
XM_043220540.1 mRNA downstream 212557 19827100 ~ 19849045 (-) True LOC122325502
XM_043219787.1 mRNA downstream 410473 19649188 ~ 19651129 (-) False LOC122324982
XM_043219786.1 mRNA downstream 410473 19649188 ~ 19651129 (-) True LOC122324982
XM_043219773.1 mRNA downstream 414514 19628786 ~ 19647088 (-) True cad
XM_043219798.1 mRNA downstream 433575 19616761 ~ 19628027 (-) True dnajc5ga
XM_043218919.1 mRNA upstream 6429 20069406 ~ 20071277 (-) True LOC122324484
XM_043219894.1 mRNA upstream 110571 20173548 ~ 20229821 (-) True rcan2
XM_043219895.1 mRNA upstream 110571 20173548 ~ 20195473 (-) False rcan2
XM_043219892.1 mRNA upstream 167998 20230975 ~ 20242311 (-) True LOC122325054
XM_043219893.1 mRNA upstream 195276 20258253 ~ 20263850 (-) True clu
TU207099 other downstream 1999 20057624 ~ 20059603 (-) True G140227
TU207100 other downstream 3103 20057624 ~ 20058499 (-) False G140227
XR_006247245.1 other downstream 446400 19601532 ~ 19615202 (-) False trim54
TU206747 other downstream 757634 19300376 ~ 19303968 (-) False angel2
TU206746 other downstream 758754 19300376 ~ 19302848 (-) False angel2
TU207486 other upstream 910427 20973404 ~ 20975750 (-) False crnkl1
TU207613 other upstream 1135733 21198710 ~ 21278741 (-) True G140616
TU207887 other upstream 1446652 21509629 ~ 21512353 (-) False LOC122324936
TU207950 other upstream 1669569 21732546 ~ 21741004 (-) False batf
TU207987 other upstream 1778136 21841113 ~ 21841468 (-) True G140883

Expression Profile