RNA id: TU207710


Basic Information

Item Value
RNA id TU207710
length 526
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G140687
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21434944 ~ 21435469 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCCAAACATGTCATGCAACTTGCGTGACTGATGTTGACAAGACTCTTCGttgatattttatgttttatttattttcggcGGCCCCAAAGATTGCCATTTCtatttttgattttgctttTCAAGCCCCTTTCTGCGAGTGCTTAATCACAACGGTGATTTTCCCCCAGTGGGACTGAGACGTTGACTAGAAATGtttaagcgtgtgtgtgttttataatggCTGATTGTTGTAAATGCAGGATCGTATCAAGCACTTTCTGACATGAGCAACTGAGTTTACGTGctggagagacacagagagaggaagtgagagaaagaggaaaatgaggaaAGGATGGACTGAGAGAGAGATGCATGTAGGAGCAAGTAAGCTGCCCCGAGGGAGCATGACTGCAGCTGTCAATCAGAGTTCAGACAGAGACTGACAGAGAATGACCTGAATGTGcaaatcacacgcacacacacataaagaaaaGGGGGGGAAGACAACATCACATTCCAGTTAACTGAAGAATGGCATTCTGAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207706 lncRNA downstream 2850 21431806 ~ 21432094 (-) True G140683
TU207638 lncRNA downstream 175423 21257390 ~ 21259521 (-) True G140637
TU207635 lncRNA downstream 187479 21246990 ~ 21247465 (-) True G140635
TU207614 lncRNA downstream 230975 21199816 ~ 21203969 (-) False G140616
TU207612 lncRNA downstream 232983 21200637 ~ 21201961 (-) True G140615
TU207711 lncRNA upstream 328 21435797 ~ 21436058 (-) True G140688
XR_006247184.1 lncRNA upstream 2223 21437692 ~ 21477830 (-) True LOC122324488
TU207870 lncRNA upstream 2798 21438267 ~ 21477858 (-) False LOC122324488
TU207882 lncRNA upstream 47149 21482618 ~ 21483300 (-) True G140808
TU207879 lncRNA upstream 61835 21497304 ~ 21505642 (-) False lin28b
XM_043219127.1 mRNA downstream 119617 21305710 ~ 21315327 (-) True hadhaa
XM_043220543.1 mRNA downstream 160706 21265415 ~ 21274238 (-) True prdm1c
XM_043219157.1 mRNA downstream 169977 21259533 ~ 21264967 (-) False xkr5a
XM_043219158.1 mRNA downstream 169997 21259533 ~ 21264947 (-) True xkr5a
XM_043219167.1 mRNA downstream 178338 21250748 ~ 21256606 (-) True tram2
XM_043219715.1 mRNA upstream 48123 21483592 ~ 21505655 (-) False lin28b
XM_043219714.1 mRNA upstream 48123 21483592 ~ 21505560 (-) True lin28b
XM_043219388.1 mRNA upstream 81310 21516779 ~ 21530446 (-) True rab10
XM_043220050.1 mRNA upstream 194801 21630270 ~ 21639546 (-) True gnpat2
XM_043220238.1 mRNA upstream 204860 21640329 ~ 21655564 (-) False lpin1b
TU207613 other downstream 156203 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 459194 20973404 ~ 20975750 (-) False crnkl1
TU207179 other downstream 1371967 20061602 ~ 20062977 (-) True G140277
TU207099 other downstream 1375341 20057624 ~ 20059603 (-) True G140227
TU207887 other upstream 74160 21509629 ~ 21512353 (-) False LOC122324936
TU207950 other upstream 297077 21732546 ~ 21741004 (-) False batf
TU207987 other upstream 405644 21841113 ~ 21841468 (-) True G140883
TU207994 other upstream 410337 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 677133 22112602 ~ 22113044 (-) True G140972

Expression Profile