RNA id: TU207948



Basic Information


Item Value
RNA id TU207948
length 322
lncRNA type read_through
GC content 0.27
exon number 2
gene id G140859
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21727653 ~ 21768597 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTggtacatttaatatttattttttctagatTTGCAAACAATTCGCAAGTTCACAtttcagtacaaaaataaaaatcccataAATTAAACAGACTACGTTTTCACAGAAAACTTCATACTTGGACGTCAGACCATTTAATGCAATGGTTAGGCAGCACACATCTGAGTAAATAAAATTCACACATTCAGAAATCAACCGTAAAAGGCAAAACATATCAGTTCTCTATTGCTCAGAACACACTAATACAACAATTCAAATCTAGCACcagtaaactaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatatatatat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207881 lncRNA downstream 28378 21698420 ~ 21699275 (-) True G140807
TU207904 lncRNA downstream 55729 21576838 ~ 21671924 (-) True G140824
TU207906 lncRNA downstream 159293 21567633 ~ 21568360 (-) True G140826
TU207896 lncRNA downstream 175422 21549084 ~ 21552231 (-) True G140817
XR_006247240.1 lncRNA downstream 215170 21507244 ~ 21512483 (-) True LOC122324936
TU207872 lncRNA upstream 2433 21771030 ~ 21774369 (-) True G140801
TU207986 lncRNA upstream 71918 21840515 ~ 21840765 (-) True G140882
TU207988 lncRNA upstream 73165 21841762 ~ 21842034 (-) True G140884
TU207989 lncRNA upstream 73529 21842126 ~ 21842345 (-) True G140885
TU207990 lncRNA upstream 73835 21842432 ~ 21842922 (-) False LOC122324884
XM_043219767.1 mRNA downstream 14591 21699406 ~ 21713062 (-) True wdr26b
XM_043219768.1 mRNA downstream 14998 21699406 ~ 21712655 (-) False wdr26b
XM_043220185.1 mRNA downstream 29959 21690418 ~ 21697694 (-) True fez2b
XM_043220184.1 mRNA downstream 29960 21690418 ~ 21697693 (-) False fez2b
XM_043220238.1 mRNA downstream 72089 21640329 ~ 21655564 (-) False lpin1b
XM_043218879.1 mRNA upstream 10730 21779327 ~ 21787486 (-) False zc3h14
XM_043218880.1 mRNA upstream 10730 21779327 ~ 21787484 (-) False zc3h14
XM_043218878.1 mRNA upstream 10730 21779327 ~ 21787484 (-) True zc3h14
XM_043218881.1 mRNA upstream 10730 21779327 ~ 21787483 (-) False zc3h14
XM_043218882.1 mRNA upstream 10730 21779327 ~ 21787168 (-) False zc3h14
TU207887 other downstream 215300 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 448912 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 751903 20973404 ~ 20975750 (-) False crnkl1
TU207179 other downstream 1664676 20061602 ~ 20062977 (-) True G140277
TU207100 other downstream 1669154 20057624 ~ 20058499 (-) False G140227
TU207987 other upstream 72516 21841113 ~ 21841468 (-) True G140883
TU207994 other upstream 77209 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 344005 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 346441 22115038 ~ 22115120 (-) True trnal-uaa_36
unassigned_transcript_2512 other upstream 347110 22115707 ~ 22115789 (-) True trnal-uaa_37

Expression Profile