RNA id: TU207988



Basic Information


Item Value
RNA id TU207988
length 273
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G140884
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21841762 ~ 21842034 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCAACCTTAGTTAACTGATTGTAATTGTTTTACTCCCATTTTTGCAGCTTCTCTATTAAATCCAGTCATGCAGCAGGCTCTTTTGCCACTGTCAGGATGTATTCTTGGGGGAAAGTAATGTTAACGCATAGCCTCTATTCTAAATGACAGAGCGCTGTTCAGTTAACACTTTTCTCTAGAACTGTGCACATCTTTCTCCTACTCTCTCACTCTCCAATCTTCTGTGCAAACCGTTGCTCAATCTTGTCCAGTAAAGCCCAAAGTACACTTCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207986 lncRNA downstream 997 21840515 ~ 21840765 (-) True G140882
TU207872 lncRNA downstream 67393 21771030 ~ 21774369 (-) True G140801
TU207947 lncRNA downstream 73165 21727653 ~ 21768597 (-) False G140859
TU207948 lncRNA downstream 73165 21727653 ~ 21768597 (-) False G140859
TU207946 lncRNA downstream 73165 21766949 ~ 21768597 (-) True G140859
TU207989 lncRNA upstream 92 21842126 ~ 21842345 (-) True G140885
TU207990 lncRNA upstream 398 21842432 ~ 21842922 (-) False LOC122324884
TU207991 lncRNA upstream 1981 21844015 ~ 21844633 (-) False LOC122324884
TU207992 lncRNA upstream 2760 21844794 ~ 21845021 (-) True G140888
TU207993 lncRNA upstream 3424 21845458 ~ 21845803 (-) False LOC122325102
XM_043219616.1 mRNA downstream 2832 21835959 ~ 21838930 (-) True LOC122324883
XM_043219611.1 mRNA downstream 5961 21824555 ~ 21835801 (-) True flvcr2b
XM_043219617.1 mRNA upstream 566 21842600 ~ 21844333 (-) True LOC122324884
XM_043219989.1 mRNA upstream 3180 21845214 ~ 21846605 (-) True LOC122325102
XM_043219988.1 mRNA upstream 10025 21852059 ~ 21854252 (-) True LOC122325101
XM_043219990.1 mRNA upstream 16042 21858076 ~ 21864517 (-) True stx7l
XM_043220544.1 mRNA upstream 22854 21864888 ~ 21865886 (-) True taar15
TU207987 other downstream 294 21841113 ~ 21841468 (-) True G140883
TU207950 other downstream 100758 21732546 ~ 21741004 (-) False batf
TU207887 other downstream 329409 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 563021 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 866012 20973404 ~ 20975750 (-) False crnkl1
TU207994 other upstream 3772 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 270568 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 273004 22115038 ~ 22115120 (-) True trnal-uaa_36
unassigned_transcript_2512 other upstream 273673 22115707 ~ 22115789 (-) True trnal-uaa_37
XR_006247154.1 other upstream 1547135 23389169 ~ 23401391 (-) False mcm9

Expression Profile