RNA id: TU207989



Basic Information


Item Value
RNA id TU207989
length 220
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G140885
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21842126 ~ 21842345 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tatgtataaccTGGATTTAGGCCAACctgctttgtatttatataggCCTTTTCCAATATTCACATGCAAATTTGCTTTATGTATTTCACTGACctctaaataaaatgtcaggAAACATGATTCCTGGCTGcataacaaaataaaggttgataAAAACTGTTTGCAAAGCTGCAGTAACAGTGGTAGTTAGTTCTTTTGCTAAGAAGGTAGGGCTTTGTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207988 lncRNA downstream 92 21841762 ~ 21842034 (-) True G140884
TU207986 lncRNA downstream 1361 21840515 ~ 21840765 (-) True G140882
TU207872 lncRNA downstream 67757 21771030 ~ 21774369 (-) True G140801
TU207947 lncRNA downstream 73529 21727653 ~ 21768597 (-) False G140859
TU207990 lncRNA upstream 87 21842432 ~ 21842922 (-) False LOC122324884
TU207991 lncRNA upstream 1670 21844015 ~ 21844633 (-) False LOC122324884
TU207992 lncRNA upstream 2449 21844794 ~ 21845021 (-) True G140888
TU207993 lncRNA upstream 3113 21845458 ~ 21845803 (-) False LOC122325102
TU208005 lncRNA upstream 66646 21908991 ~ 21909359 (-) True G140901
XM_043219616.1 mRNA downstream 3196 21835959 ~ 21838930 (-) True LOC122324883
XM_043219611.1 mRNA downstream 6325 21824555 ~ 21835801 (-) True flvcr2b
XM_043219617.1 mRNA upstream 255 21842600 ~ 21844333 (-) True LOC122324884
XM_043219989.1 mRNA upstream 2869 21845214 ~ 21846605 (-) True LOC122325102
XM_043219988.1 mRNA upstream 9714 21852059 ~ 21854252 (-) True LOC122325101
XM_043219990.1 mRNA upstream 15731 21858076 ~ 21864517 (-) True stx7l
XM_043220544.1 mRNA upstream 22543 21864888 ~ 21865886 (-) True taar15
TU207987 other downstream 658 21841113 ~ 21841468 (-) True G140883
TU207950 other downstream 101122 21732546 ~ 21741004 (-) False batf
TU207887 other downstream 329773 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 563385 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 866376 20973404 ~ 20975750 (-) False crnkl1
TU207994 other upstream 3461 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 270257 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 272693 22115038 ~ 22115120 (-) True trnal-uaa_36
unassigned_transcript_2512 other upstream 273362 22115707 ~ 22115789 (-) True trnal-uaa_37
XR_006247154.1 other upstream 1546824 23389169 ~ 23401391 (-) False mcm9

Expression Profile