RNA id: TU207990



Basic Information


Item Value
RNA id TU207990
length 491
lncRNA type sense_over
GC content 0.31
exon number 1
gene id LOC122324884
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21842432 ~ 21844633 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCTTAAGGTTCACAACAGCACAGAAAACTCCAAAAATAGATTCAGTGACAAATCAGAGAGAAAAGCTGCAATACTGCTGGGGATTCTGGTCATTgtgtttcttttatgtttaCTGCCGTATTATATTTGTTCTTTAGTGTGTTCATATGACAATGCTGACAGTTTATATGTCAGATTAattgctgtaatatttttctttctgaacTCCACCGTTAATCCCATAATTTATGCTTTATTCTATCCCTGGTTTCAGAAAAGCTTAAAGatcattttcacattaaaagtgttaaataaagACTCATCCCTGATGAATGTACTTTAAGttattgaaaacaaaatgttttctgttgtttagTTTCATAAGTGTACTGGACAAAATGGTGTATAAACAGTTACAAAGAAATGGCAgttaaaattgaattgaaaatgtgacatttcgtagaaaaactgaaatagtattttcttgtaaagcaTATTCCagtaatatttg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207989 lncRNA downstream 87 21842126 ~ 21842345 (-) True G140885
TU207988 lncRNA downstream 398 21841762 ~ 21842034 (-) True G140884
TU207986 lncRNA downstream 1667 21840515 ~ 21840765 (-) True G140882
TU207872 lncRNA downstream 68063 21771030 ~ 21774369 (-) True G140801
TU207948 lncRNA downstream 73835 21727653 ~ 21768597 (-) False G140859
TU207991 lncRNA upstream 1093 21844015 ~ 21844633 (-) False LOC122324884
TU207992 lncRNA upstream 1872 21844794 ~ 21845021 (-) True G140888
TU207993 lncRNA upstream 2536 21845458 ~ 21845803 (-) False LOC122325102
TU208005 lncRNA upstream 66069 21908991 ~ 21909359 (-) True G140901
TU208019 lncRNA upstream 107824 21950746 ~ 21970149 (-) False LOC122325423
XM_043219616.1 mRNA downstream 3502 21835959 ~ 21838930 (-) True LOC122324883
XM_043219611.1 mRNA downstream 6631 21824555 ~ 21835801 (-) True flvcr2b
XM_043219989.1 mRNA upstream 2292 21845214 ~ 21846605 (-) True LOC122325102
XM_043219988.1 mRNA upstream 9137 21852059 ~ 21854252 (-) True LOC122325101
XM_043219990.1 mRNA upstream 15154 21858076 ~ 21864517 (-) True stx7l
XM_043220544.1 mRNA upstream 21966 21864888 ~ 21865886 (-) True taar15
XM_043220356.1 mRNA upstream 27820 21870742 ~ 21871764 (-) True LOC122325342
TU207987 other downstream 964 21841113 ~ 21841468 (-) True G140883
TU207950 other downstream 101428 21732546 ~ 21741004 (-) False batf
TU207887 other downstream 330079 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 563691 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 866682 20973404 ~ 20975750 (-) False crnkl1
TU207994 other upstream 2884 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 269680 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 272116 22115038 ~ 22115120 (-) True trnal-uaa_36
unassigned_transcript_2512 other upstream 272785 22115707 ~ 22115789 (-) True trnal-uaa_37
XR_006247154.1 other upstream 1546247 23389169 ~ 23401391 (-) False mcm9

Expression Profile