RNA id: TU207991



Basic Information


Item Value
RNA id TU207991
length 619
lncRNA type sense_over
GC content 0.40
exon number 1
gene id LOC122324884
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21842432 ~ 21844633 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ccagtgagcaGACCATTACAAttgtccaccctgctggtgatgacggcatggactagtttctccaggtcttgcctgggcacaaagcatctgattcttgcaatattttttaggtgatagtacgctgatttagtcactgctttgacatgacagctgaaactaaggtcggtctctagaatcacaccaagattcttgacttgccttttggttgtttgaccccttgagtcaaggtatgcattcaccttgtgaacttcatctttatttccaaacgcaatgacctcagttttctccttgtttaactgaggAAAAatttggcacatccaactgttgatttcatcaatgcattggcagagtgagtcaatggggctgtagctttaaaatgtcttaaaataatcCAGTACGAATAATTTAAACCAACAACTCAGGGTTTACACTGACTAATTAATCAACGGAATAAAGAGAAActaattgtgtgtttgtgtgtgtgtgtatatatatggtttGTACACAGACCCGATTTCatgaaatttagattttaagacAGTCGGCCTACAGATGctgtcttgtgtttttgttcaccTACAGTTTGACTGAGGGTGAAGGTGAAGGTTAAATGTGTCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207990 lncRNA downstream 1093 21842432 ~ 21842922 (-) False LOC122324884
TU207989 lncRNA downstream 1670 21842126 ~ 21842345 (-) True G140885
TU207988 lncRNA downstream 1981 21841762 ~ 21842034 (-) True G140884
TU207986 lncRNA downstream 3250 21840515 ~ 21840765 (-) True G140882
TU207872 lncRNA downstream 69646 21771030 ~ 21774369 (-) True G140801
TU207992 lncRNA upstream 161 21844794 ~ 21845021 (-) True G140888
TU207993 lncRNA upstream 825 21845458 ~ 21845803 (-) False LOC122325102
TU208005 lncRNA upstream 64358 21908991 ~ 21909359 (-) True G140901
TU208019 lncRNA upstream 106113 21950746 ~ 21970149 (-) False LOC122325423
TU208020 lncRNA upstream 117563 21962196 ~ 21963699 (-) False LOC122325422
XM_043219616.1 mRNA downstream 5085 21835959 ~ 21838930 (-) True LOC122324883
XM_043219611.1 mRNA downstream 8214 21824555 ~ 21835801 (-) True flvcr2b
XM_043219989.1 mRNA upstream 581 21845214 ~ 21846605 (-) True LOC122325102
XM_043219988.1 mRNA upstream 7426 21852059 ~ 21854252 (-) True LOC122325101
XM_043219990.1 mRNA upstream 13443 21858076 ~ 21864517 (-) True stx7l
XM_043220544.1 mRNA upstream 20255 21864888 ~ 21865886 (-) True taar15
XM_043220356.1 mRNA upstream 26109 21870742 ~ 21871764 (-) True LOC122325342
TU207987 other downstream 2547 21841113 ~ 21841468 (-) True G140883
TU207950 other downstream 103011 21732546 ~ 21741004 (-) False batf
TU207887 other downstream 331662 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 565274 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 868265 20973404 ~ 20975750 (-) False crnkl1
TU207994 other upstream 1173 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 267969 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 270405 22115038 ~ 22115120 (-) True trnal-uaa_36
unassigned_transcript_2512 other upstream 271074 22115707 ~ 22115789 (-) True trnal-uaa_37
XR_006247154.1 other upstream 1544536 23389169 ~ 23401391 (-) False mcm9

Expression Profile