RNA id: TU207992


Basic Information

Item Value
RNA id TU207992
length 228
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G140888
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21844794 ~ 21845021 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttgagtctggatttaaaagtgactaatgtttcagcacatctgatctcttcaggaagctggttccagatgcgagcagcataataactaaaagcagattctccttgtttggtgtgaacctttggtttttctaactgacttgatcctagtgatctgagtggtctgttaggtgtataaatagtgatcatatctgcaatgtatttaggtcctagtccattgagtgatttata

Function

GO:

id name namespace
GO:0021514 ventral spinal cord interneuron differentiation biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207991 lncRNA downstream 161 21844015 ~ 21844633 (-) False LOC122324884
TU207990 lncRNA downstream 1872 21842432 ~ 21842922 (-) False LOC122324884
TU207989 lncRNA downstream 2449 21842126 ~ 21842345 (-) True G140885
TU207988 lncRNA downstream 2760 21841762 ~ 21842034 (-) True G140884
TU207986 lncRNA downstream 4029 21840515 ~ 21840765 (-) True G140882
TU207993 lncRNA upstream 437 21845458 ~ 21845803 (-) False LOC122325102
TU208005 lncRNA upstream 63970 21908991 ~ 21909359 (-) True G140901
TU208019 lncRNA upstream 105725 21950746 ~ 21970149 (-) False LOC122325423
TU208020 lncRNA upstream 117175 21962196 ~ 21963699 (-) False LOC122325422
TU208021 lncRNA upstream 117175 21962196 ~ 21964129 (-) True LOC122325422
XM_043219617.1 mRNA downstream 461 21842600 ~ 21844333 (-) True LOC122324884
XM_043219616.1 mRNA downstream 5864 21835959 ~ 21838930 (-) True LOC122324883
XM_043219611.1 mRNA downstream 8993 21824555 ~ 21835801 (-) True flvcr2b
XM_043219989.1 mRNA upstream 193 21845214 ~ 21846605 (-) True LOC122325102
XM_043219988.1 mRNA upstream 7038 21852059 ~ 21854252 (-) True LOC122325101
XM_043219990.1 mRNA upstream 13055 21858076 ~ 21864517 (-) True stx7l
XM_043220544.1 mRNA upstream 19867 21864888 ~ 21865886 (-) True taar15
XM_043220356.1 mRNA upstream 25721 21870742 ~ 21871764 (-) True LOC122325342
TU207987 other downstream 3326 21841113 ~ 21841468 (-) True G140883
TU207950 other downstream 103790 21732546 ~ 21741004 (-) False batf
TU207887 other downstream 332441 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 566053 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 869044 20973404 ~ 20975750 (-) False crnkl1
TU207994 other upstream 785 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 267581 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 270017 22115038 ~ 22115120 (-) True trnal-uaa_36
unassigned_transcript_2512 other upstream 270686 22115707 ~ 22115789 (-) True trnal-uaa_37
XR_006247154.1 other upstream 1544148 23389169 ~ 23401391 (-) False mcm9

Expression Profile