RNA id: TU207993



Basic Information


Item Value
RNA id TU207993
length 346
lncRNA type sense_over
GC content 0.27
exon number 1
gene id LOC122325102
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21845214 ~ 21846917 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCGTATTATATTTGTTCTTTCGTGATTCCATATGAGTTGTTTTATGTCAGAGAtgttactataatatttttctttttgaactCCACCATTAATCCCATCATTTATGCTTTATTCTATCCCTGGTTCCAGAGAAGCTTAAAACTAATGTTCACATGTAAAGTGTTTAATAAAGACTCATCCCTGATGAATGTACTCTAATGCACTGAATGTAAATgtctattttttaatatattgtcaCATTAAACACAAGTTTTGGCTACAAAATATGTACTaaatatttcttcaaaaatTACTGATATACAGTTTATTGTacttattattgtatttatactttttttgttttac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207992 lncRNA downstream 437 21844794 ~ 21845021 (-) True G140888
TU207991 lncRNA downstream 825 21844015 ~ 21844633 (-) False LOC122324884
TU207990 lncRNA downstream 2536 21842432 ~ 21842922 (-) False LOC122324884
TU207989 lncRNA downstream 3113 21842126 ~ 21842345 (-) True G140885
TU207988 lncRNA downstream 3424 21841762 ~ 21842034 (-) True G140884
TU208005 lncRNA upstream 63188 21908991 ~ 21909359 (-) True G140901
TU208019 lncRNA upstream 104943 21950746 ~ 21970149 (-) False LOC122325423
TU208020 lncRNA upstream 116393 21962196 ~ 21963699 (-) False LOC122325422
TU208021 lncRNA upstream 116393 21962196 ~ 21964129 (-) True LOC122325422
XR_006247296.1 lncRNA upstream 116394 21962197 ~ 21963706 (-) False LOC122325422
XM_043219617.1 mRNA downstream 1125 21842600 ~ 21844333 (-) True LOC122324884
XM_043219616.1 mRNA downstream 6528 21835959 ~ 21838930 (-) True LOC122324883
XM_043219615.1 mRNA downstream 9659 21824555 ~ 21835799 (-) False flvcr2b
XM_043219988.1 mRNA upstream 6256 21852059 ~ 21854252 (-) True LOC122325101
XM_043219990.1 mRNA upstream 12273 21858076 ~ 21864517 (-) True stx7l
XM_043220544.1 mRNA upstream 19085 21864888 ~ 21865886 (-) True taar15
XM_043220356.1 mRNA upstream 24939 21870742 ~ 21871764 (-) True LOC122325342
XM_043220485.1 mRNA upstream 33351 21879154 ~ 21880179 (-) True LOC122325436
TU207987 other downstream 3990 21841113 ~ 21841468 (-) True G140883
TU207950 other downstream 104454 21732546 ~ 21741004 (-) False batf
TU207887 other downstream 333105 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 566717 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 869708 20973404 ~ 20975750 (-) False crnkl1
TU207994 other upstream 3 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 266799 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 269235 22115038 ~ 22115120 (-) True trnal-uaa_36
unassigned_transcript_2512 other upstream 269904 22115707 ~ 22115789 (-) True trnal-uaa_37
XR_006247154.1 other upstream 1543366 23389169 ~ 23401391 (-) False mcm9

Expression Profile