RNA id: TU208601



Basic Information


Item Value
RNA id TU208601
length 376
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G141319
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22878732 ~ 22890133 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCGTGAAGTAACTCCCTTTGGGTCCAACTCCTCCAATCACGACGTCGGCTCCAGTCATTCCTCCATTGGGGCTGAAGCCGAAACCGACCCAGCCGACAGTGTTAAAGGTGAGCTCGAACAAGATGGTGTCCCGGATTTCATCAAATCCCCACTTCAGCTGCACCTTGTGCTCGAGGTCCAGGTGTTCAGAGAAAGGCAGAAGAAGGTCTTCCTGAGCCCAGGACCACTGGACTGTAATTAAGACCAGGACAAAAGATAAAGTGATCATCTTTCCTTTCAAAATCTGACAAACAGTGTCAACTGATCGTATAATGCACACATTGAACCATTcgctctcgcggtactttgatgtctTTCACTGATTGGTAGCTGCAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU208585 lncRNA downstream 52641 22830914 ~ 22831421 (-) True G141307
TU208522 lncRNA downstream 143135 22739641 ~ 22740927 (-) True G141283
TU208473 lncRNA downstream 221821 22660615 ~ 22662241 (-) True G141255
TU208238 lncRNA downstream 342368 22541463 ~ 22541694 (-) True G141083
TU208237 lncRNA downstream 342912 22540688 ~ 22541150 (-) True G141082
TU208617 lncRNA upstream 19124 22909257 ~ 22915952 (-) True G141331
TU208641 lncRNA upstream 164915 23055048 ~ 23056056 (-) True G141343
TU208678 lncRNA upstream 305040 23195173 ~ 23196196 (-) True G141370
TU208717 lncRNA upstream 680863 23570996 ~ 23571790 (-) True G141404
TU208815 lncRNA upstream 880944 23771077 ~ 23771457 (-) True G141477
XM_043219252.1 mRNA downstream 6917 22859476 ~ 22877145 (-) False snx9b
XM_043219248.1 mRNA downstream 6917 22859476 ~ 22877145 (-) True snx9b
XM_043219251.1 mRNA downstream 6918 22859476 ~ 22877144 (-) False snx9b
XM_043219250.1 mRNA downstream 6918 22859476 ~ 22877144 (-) False snx9b
XM_043219249.1 mRNA downstream 6918 22859476 ~ 22877144 (-) False snx9b
XM_043220611.1 mRNA upstream 27531 22917664 ~ 23019735 (-) False afdna
XM_043220622.1 mRNA upstream 27531 22917664 ~ 23019735 (-) False afdna
XM_043220621.1 mRNA upstream 27531 22917664 ~ 23019735 (-) False afdna
XM_043220619.1 mRNA upstream 27531 22917664 ~ 23019735 (-) False afdna
XM_043220610.1 mRNA upstream 27531 22917664 ~ 23019735 (-) False afdna
unassigned_transcript_2512 other downstream 768273 22115707 ~ 22115789 (-) True trnal-uaa_37
unassigned_transcript_2511 other downstream 768942 22115038 ~ 22115120 (-) True trnal-uaa_36
TU208103 other downstream 771018 22112602 ~ 22113044 (-) True G140972
TU207994 other downstream 1037145 21845806 ~ 21846917 (-) False LOC122325102
TU207987 other downstream 1042594 21841113 ~ 21841468 (-) True G140883
XR_006247154.1 other upstream 499036 23389169 ~ 23401391 (-) False mcm9
XR_006247155.1 other upstream 500332 23390465 ~ 23401391 (-) False mcm9
XR_006247156.1 other upstream 500334 23390467 ~ 23401391 (-) False mcm9
XR_006247216.1 other upstream 901944 23792077 ~ 23823050 (-) False tbc1d32
TU208856 other upstream 1114554 24004687 ~ 24006665 (-) True G141502

Expression Profile