RNA id: TU209170



Basic Information


Item Value
RNA id TU209170
length 233
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G141679
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24788672 ~ 24788904 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CACAGGCATAAATCAGCTCTGGCTCCCAGCGACAGGCGTCTTTCTATTACAGCGTTGCGTTGTGGCTGGATTGAATCGGGGTTAACCACATGATGTAGCTGGTAAACTTTCCCAGCTTTTTGGCCAATGATTTTTAAGATGCAAGAAGAAAAATTGCGTCCGTTGCTTTGAGCTGCACGGCGCCTGCCGTCGATCCCGCCTGTTAGCCGTTCAACGAAACCAGCGTGTTAATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209158 lncRNA downstream 11809 24776615 ~ 24776863 (-) True G141676
TU209124 lncRNA downstream 60939 24727061 ~ 24727733 (-) True G141650
TU209121 lncRNA downstream 61988 24724942 ~ 24726684 (-) True G141648
TU209141 lncRNA downstream 96186 24692002 ~ 24692486 (-) True G141662
TU209133 lncRNA downstream 172025 24611866 ~ 24616647 (-) True LOC122325459
TU209173 lncRNA upstream 5951 24794855 ~ 24798633 (-) True G141682
TU209174 lncRNA upstream 23921 24812825 ~ 24813156 (-) True G141683
TU209175 lncRNA upstream 32296 24821200 ~ 24821426 (-) True G141684
TU209531 lncRNA upstream 88844 24877748 ~ 24916483 (-) False G141889
TU209533 lncRNA upstream 91543 24880447 ~ 24916483 (-) False G141889
XM_043220220.1 mRNA downstream 67566 24699172 ~ 24721106 (-) True mia3
XM_043219695.1 mRNA downstream 97583 24682627 ~ 24691089 (-) True brox
XM_043219697.1 mRNA downstream 98507 24682627 ~ 24690165 (-) False brox
XM_043219698.1 mRNA downstream 106198 24678486 ~ 24682474 (-) True LOC122324924
XM_043219699.1 mRNA downstream 111048 24674210 ~ 24677624 (-) True LOC122324925
XM_043218598.1 mRNA upstream 40945 24829849 ~ 24832990 (-) True hlx1
XM_043220390.1 mRNA upstream 49748 24838652 ~ 24851779 (-) True rhpn1
XM_043220235.1 mRNA upstream 63565 24852469 ~ 24861840 (-) True naprt
XM_043220236.1 mRNA upstream 76555 24865459 ~ 24867178 (-) True c20h8orf82
XM_043218714.1 mRNA upstream 287584 25076488 ~ 25084576 (-) False tbc1d7
TU209125 other downstream 141251 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 257797 24525882 ~ 24530875 (-) False slc35b2
TU209065 other downstream 527636 24257786 ~ 24261036 (-) False LOC122324315
TU208856 other downstream 782007 24004687 ~ 24006665 (-) True G141502
XR_006247216.1 other downstream 965622 23792077 ~ 23823050 (-) False tbc1d32
TU209178 other upstream 58761 24847665 ~ 24851761 (-) False rhpn1
TU209665 other upstream 539676 25328580 ~ 25329605 (-) False wasf1
TU209701 other upstream 542022 25330926 ~ 25377416 (-) False wasf1
TU209689 other upstream 604216 25393120 ~ 25407942 (-) False mettl24
TU209680 other upstream 607304 25396208 ~ 25407942 (-) False mettl24

Expression Profile