RNA id: TU210370



Basic Information


Item Value
RNA id TU210370
length 224
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G142362
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26547188 ~ 26555553 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttatcttttttttccccgccGGCCTCGCATGATTTCATCGCGATACGATAACAATGCGTCTGGTGAAACACTCTCCCGCTGCGTCGCTGCGCTGGGATCGGGGGAACGgTTGCGTGGAGGTTGATCTTCAGGGCCTCAGTTTtgctgaaacaggaagctgtCAGTAGATTCTGGACACTGAACACAACTGTAAGTGACAGAGGTCAGTCAACAAGAGCGGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210364 lncRNA downstream 67403 26479302 ~ 26479785 (-) True G142356
TU210363 lncRNA downstream 67992 26478551 ~ 26479196 (-) True G142355
TU210362 lncRNA downstream 74428 26472357 ~ 26472760 (-) True G142354
TU210349 lncRNA downstream 165915 26364019 ~ 26381273 (-) False G142349
TU210352 lncRNA upstream 1905 26557458 ~ 26560362 (-) False rps29
TU210353 lncRNA upstream 1905 26557458 ~ 26560362 (-) False rps29
TU210355 lncRNA upstream 1905 26557458 ~ 26560362 (-) False rps29
TU210356 lncRNA upstream 1905 26557458 ~ 26560362 (-) False rps29
TU210358 lncRNA upstream 1905 26557458 ~ 26560362 (-) False rps29
XM_043220471.1 mRNA downstream 107265 26325231 ~ 26439923 (-) False LOC122325425
XM_043220473.1 mRNA downstream 107266 26325231 ~ 26439922 (-) False LOC122325425
XM_043220470.1 mRNA downstream 107266 26325231 ~ 26439922 (-) True LOC122325425
XM_043220472.1 mRNA downstream 107267 26325231 ~ 26439921 (-) False LOC122325425
XM_043220345.1 mRNA downstream 239376 26307401 ~ 26307812 (-) True LOC122325330
XM_043218675.1 mRNA upstream 3393 26558946 ~ 26560387 (-) False rps29
XM_043220347.1 mRNA upstream 14214 26569767 ~ 26574013 (-) True LOC122325332
XM_043219305.1 mRNA upstream 370680 26926233 ~ 26940284 (-) True ganaba
XM_043220055.1 mRNA upstream 391777 26947330 ~ 26948895 (-) True her7
XM_043220045.1 mRNA upstream 590923 27146476 ~ 27148045 (-) True LOC122325133
TU210168 other downstream 312943 26232024 ~ 26234245 (-) True G142278
TU210175 other downstream 359269 26185660 ~ 26187919 (-) True G142281
XR_006247174.1 other downstream 450217 26088415 ~ 26096971 (-) False pgfa
XR_006247173.1 other downstream 450217 26088415 ~ 26096971 (-) True pgfa
XR_006247181.1 other downstream 493010 26052206 ~ 26054178 (-) False LOC122324466
unassigned_transcript_2516 other upstream 59090 26614643 ~ 26614730 (-) True trnas-gcu_32
TU210476 other upstream 367262 26922815 ~ 26924987 (-) True G142444
TU210568 other upstream 674250 27229803 ~ 27256258 (-) False LOC122325335

Expression Profile