RNA id: XM_043218662.1


Basic Information

Item Value
RNA id XM_043218662.1
length 2999
RNA type mRNA
GC content 0.59
exon number 10
gene id pak5
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25888169 ~ 25935072 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGATTGGTGGTAGTGGTGCAGCGAGTGAATATCTGGGCAGGGCGAGCTCAGATGTCTGTGGCGTGTTTGTGAGCGGCTGGCGGCTCTAAATAGCCGTGTTCTGCAGGATCTGGTGGAGGTCCAGGAGCTGACAGATGGTGCGGGGACGAGCGGAGCCCGGGGCCTCAGGCACACACTCTCAGAGTCAGCGAGTCGGCCGCTAGCTCGGATCCTGAATGGAGCTTCACTCTTTGTTTGAGTAGCATGTCAACTTCTGACTCCACCAGTCACGATGTTtgggaagaagaagaagcgtCTGGAGATCTCGGCTCCGTCTAACTTCGAGCACCGTGTTCACACCGGCTTCGACCCGCAGCAGCAGAAGTTCACCGGTCTGCCGCAGCAATGGCAGAGTCTTCTCGCCGACACTGCCAACCGGCCCAAGCCCATGGTGGACCCCTCCTACATCACGCCCATGAAGATATCTCCCAAGAAAGTCCGGTTGGCTGAATCGCCGTTGCGAAAAACCATCGTCCGCGGGAGCCAGCCGCCGAAGGACGCCTCCATCAACGGCCTGCTGGAGGAGTTTGACAGCATCTCCGTCACCCGCTCCAACTCTCTGAGGAAAGAGAGTCCGCCGGGAGCCCATCAGCCCGGCGGGAGCAAACCAGCATCTGCTTCCACGTCCAACGCCGGCGGACCCGAGGAGAACGGCTTCGGACACTATTACGGCCGCTTCTCATGCGACCTGGACAGTAGTAAAGACTTCTCTCTAGAGGCGTACCGTGAGCGAGCCGTCCACGATGGCGACTGGGCAGTCGGGCGGCACTACCGCTTCTCTCTCAGACAGAACGGCCATCCCATTCGCAGCCCTTTCTATCCTGACGCCATGCCGCAGAAGTCCTCCGACTACGCCAAAATGCCGCCCGACTACCACGCCTACCTGGAGAGCAAGATGCGGCTGTCCAGCGATGAGATGGCCATGGGCGGCCGCAGGGAATACTACCGCGCCTCTCTGGGGGGATCCAGCCAGGACTACCGGGAGCATCCGCTGGGAACGCCGTCGCGTGTCTCCATCCACAGCGAGCAGATGAGCTACCCCGACGGAGACTGGGGGTACGGAGCGGGATTGAGAGACGAATACGACAAGAGGCCCAAGTCCTCGTACATCGGTCAGACGAGCCCCCAGCCGGCCATTCGTCAGCGCTCGCGCTCGGGGTCGGGCCTGCAGGAGCCCAGCCTGCCCTACGGCATCAGCGCGTTCAGAGCGGCTCCGCAGGGGCCCTACAGCTCCTACACGTACCCAAGACTGTCCGAGAACACGTCCTCACTCGTCATGGGCAAGGGCGAGTATGAGCGCGGGGCCCGTGAGGGGAGCCCACAGGGGCCGGGGCCCGAGACGTATCAGCGCGTTCCCCTCAAACTACCTCAGAGCCACGGCAAGCCCGGTTACCCGGCGGGTCTCCAGTACCACTACCGGCCGGCACAGCCCAGTCCTCCCTACACCCCGCAGGGAGCGCACTCGCAGCCCTCCTCGCCCTTCACCCCGGGCCCCGGGGCCTATCCACCGCCCAGCTGGGGCTCGGCCTCCGAGCAGCCGCCTTGCAGGGTTTCTCACGAACAGTTCCGGGCGGCGCTGCAGCTGGTGGTCAACCCGGGAGACCCCCGCGAGTACCTGGACAACTTCCTGAAGATCGGCGAGGGATCCACGGGCATCGTGTGCATCGCCACCGAGAAGCACAGCGGCAAACAGGTGGCCGTGAAGAAGATGGACCTGAGGAAACAGCAGCGGCGCGAGCTACTCTTTAATGAGGTGGTCATCATGAGAGACTACCATCACGAGAACGTGGTGGACATGTACAACAGTTACCTGGTCGGGGATGAACTCTGGGTGGTGATGGAGTTCCTAGAGGGCGGGGCCTTGACGGACATCGTCACTCACACCAGGATGAATGAGGAGCAGATCGCCACGGTCTGTCTGTCGGTGCTGAAGGCGCTCTCTTATCTTCACACTCAGGGCGTCATACACCGAGACATCAAGAGCGACTCTATCCTGCTGACCAGCGATGGACGGATCAAGCTCTCGGACTTCGGCTTCTGTGCTCAAGTGTCTAAAGAGGTTCCCAAGAGGAAGTCTCTGGTGGGAACGCCGTACTGGATGGCTCCGGAGGTCATCTCCAGACTGCCCTACGGCACGGAGGTGGACATCTGGTCTCTGGGCATCATGGTGATCGAGATGGTGGACGGAGAGCCGCCGTACTTCAACGAGCCGCCGCTGCAGGCCATGAGACGGATACGAGACAACCTGCCCCCGCGACTCAAGGAGTCTCACAAGGTGTCCTCGGTTCTGCGGGCGTTCCTGGACCTGATGCTGGTTCGAGAGCCGTCTCAGAGGGCCTCGGCCCCGGAGCTGCTCCAGCACTCGTTCCTGAAGCTGTCGGGGCCCCCGGCCTGCATCGTCCCTCTGATGCGTCACTACCGCCACCGCTAGTCTCAGACGTCTTCTCACGCTAATGAGAAGATGTATTTTAGAGCAATTGTAAGTTTTACTTGTACAGTTTTGATAAACGGCAGTATTTTTGTTGTGATGTCACCATGGTGAAATGGGCAGTATTACCTAGAACCTGAGAGTTTCTGCAAAATAACCACAACAATAATTATAGACTTTCCTACTGTTTATATTTGGTTTTTTTGAAGATGGCCATTGCAGACAGATGAATccgaatatatttatttattctacgTTTGTAGGTCGCGCCAGAGTTTTCTACGCTGGTTTGGTTCTGGTTTTCAGTAGTGTGGCCTTTTCACGCTCATTCTCACGCGCGATCTCTAGCAATATTCGGCACAATCCTCGCGTGTTTCCTCGTGGCGTCTCACCCGTGTCTCATGGCTCACTGTGATGATCTGGAAATGCGTGTTTCTGTAGGACTCTTCAGATCCGCTGTCGCGTCGCTTTTGTACGGTGATCCTGCATGTGTGTCACTAAGAGCtgctttcaataaaaaaacacaaacgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210004 lncRNA downstream 24396 25838372 ~ 25865079 (-) False G142201
TU210079 lncRNA upstream 79319 26006269 ~ 26010388 (-) True G142260
TU210080 lncRNA upstream 83700 26010650 ~ 26012248 (-) True G142261
TU210062 lncRNA upstream 90421 26017371 ~ 26033198 (-) True G142245
TU210059 lncRNA upstream 91769 26018719 ~ 26055565 (-) True G142242
TU210064 lncRNA upstream 94537 26021487 ~ 26077073 (-) True G142247
XM_043220555.1 mRNA downstream 113312 25754500 ~ 25776163 (-) True LOC122325519
XM_043219136.1 mRNA downstream 135473 25747667 ~ 25754002 (-) True LOC122324601
XM_043220313.1 mRNA downstream 258540 25626652 ~ 25630935 (-) True LOC122325306
XM_043220315.1 mRNA downstream 259256 25626652 ~ 25630219 (-) False LOC122325306
XM_043220308.1 mRNA downstream 274199 25609316 ~ 25615276 (-) True hsp90aa1.1
XM_043218762.1 mRNA upstream 17184 25944134 ~ 25959702 (-) True LOC122324391
XM_043220153.1 mRNA upstream 37033 25963983 ~ 25976828 (-) True magl
XM_043220357.1 mRNA upstream 109444 26036394 ~ 26049767 (-) True lrfn5b
XM_043218888.1 mRNA upstream 125256 26052206 ~ 26054369 (-) False LOC122324466
XM_043220296.1 mRNA upstream 145455 26072405 ~ 26079546 (-) False znf410
XR_006247208.1 other downstream 135467 25750917 ~ 25754008 (-) False LOC122324601
XR_006247207.1 other downstream 135471 25752541 ~ 25754004 (-) False LOC122324601
XR_006247206.1 other downstream 135509 25752541 ~ 25753966 (-) False LOC122324601
XR_006247205.1 other downstream 135798 25750923 ~ 25753677 (-) False LOC122324601
XR_006247204.1 other downstream 135798 25752541 ~ 25753677 (-) False LOC122324601
TU210061 other upstream 123879 26050829 ~ 26054469 (-) True LOC122324466
XR_006247179.1 other upstream 125256 26052206 ~ 26054369 (-) False LOC122324466
XR_006247180.1 other upstream 125256 26052206 ~ 26054369 (-) False LOC122324466
XR_006247182.1 other upstream 125256 26052206 ~ 26054178 (-) False LOC122324466
XR_006247181.1 other upstream 125256 26052206 ~ 26054178 (-) False LOC122324466

Expression Profile