RNA id: XM_043219004.1


Basic Information

Item Value
RNA id XM_043219004.1
length 2874
RNA type mRNA
GC content 0.41
exon number 9
gene id LOC122324509
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16113092 ~ 16118444 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGATTTCCACAGCAAAAGGGAGCGTGCTTAGCGCATGATTGCGTTGTGACTACAATGTGACTACATTTCCCGTGGTGCATTAGGCTTAGGTTACTGCCTTGGTGCTAAAGGATCTCGGCATTACTTTGCTACTCATTGAGGGCCCTAAACCATGTACACAGAGTTAGCAGTGGCGTTGGGGCTTGGAGCAGTGGTAGCCCTGGTGTTcctgaagaagagaaagagtGTCCTGAAAGCTCAGGATGGCTGGTGGGGTGTGGGAACTTGTCCCCAGGGTCCCGAAGATAACGGTATCCGCCCGTTCAAAGTTGAGACAACTTCAGAAGAGATTGAGGATCTGCACCGCAGGCTAGATCAGACCCGCTCTTTTCCTTCTCTGGAAGACAGTCAGTTTAACTATGGCTTCAACTCCAAATACCTTGAGAAGGTGGTGTCTTATTGGAGGAATGACTTTAACTGGAGGAAACAAGTGGATAAACTGAACAAATACCCtcatttcaaaaccaaaatcgAAGGTATTGATATTCACTATGTTCACGTGAAACCAAAAAACCTGGCCGAGGGAACCCGTGCTGTGCCTCTGATGATGGTACATGGATGGCCAGGCTCCTTCTATGAGTTTTATGGTATCATCCCCCTGCTTACGGAGCCATCCAGTCCTGATGATATAACCTTCGAAGTCATTTGTCCCTCAATACCTGGTTATGGTTTCTCAGAGGCTCCACGTAAGAAAGGTTTTGACAGCGTATGTGCAGCTCACATATTTAATAAGCTGATGAAGAGGCTTGGTTTCAACCAGTACTACGTTCAGGGAGGAGACTGGGGCTCGCTTATTACCACTAATATGGCCCAGCTGGAGCCCAATGCTGTGAAAGGTCTCCACATTAACTTTGCTCCTCCTGGAAAAGCAGGCCTTGTCATGATATTATCTATAGTTTTTGGTCGTCGATTCCCCAAACTCTTTGGCTTCACCGAGCATGATGTAAAACGCCTTTTCCCCACCATGGAAAAGCTTGTAGTAGATGCAGTAAGGGAGACTGGATACATGCACATACAGTCCACTAAACCAGACACCGCAGGCCGTGGATTGAATGACTCTCCCGTTGGTTTGGCTGCCTACATTTTGGAGAAATTTTCAACCTGGACTGATCCTGAGTTTAAGAAGCTCGAGGACGGTGGGCTGGAGAGGAAGTATTCTCTTGATGATCTCCTGACGAATGTGATGATCTACTGGACCTCCAGGTGCATTATATCCTCCATGCGTTTCTACAAGGAGAACTTCAGCAAAGGGCTGAATCAGCCCCACGCAAAGCTTCCAGTTTACGTTCCGACCGGTGTGGCCTCGTTCCCTAATGAGCTGATGCATTCCCCTAAATTGTGGGTGACACAGAAATACCATAAGCTCAAGACTTACACTCCCATGGCTCGCGGGGGCCACTTTGCTGCTATGGAGGAGCCACAGTTATTGGCAGAGGATGTTCAAAACTTTGTCAAGactgtggaaaagaaaaagaagaaatagacAGTTCTGTGTccttttattcatattcatggACTAATGGAACTCACTGTTTAGATGCATAGATGAccatgagttaaaaaaaaacaacaactcctGGACCACAACACATGGCTAATCCTAATCATTACTGTCAAAAactaatgcattaacattaatttttggGCAACAGCACTGTTTAATCCTAGAAATGTATTAACACAATTTGATTTGTATTACGTGCCttaatttttattgcagttcaaataatgatataataatgaCTGGAGCTTACTTACAGTGATTATTTGTGGTGATGCTGAAGTGTTTTCTGAATGGGACCACAGGAATCAGCTTAATGCTGATGTTAAACTGTGTGAAATGACAGTCAGTAATTTATTGAAGCACTTTTAATTGCAGTTATTTAATGATAGTAATAAGTAGTAAAGAACGAAATCACAAAAAGACAGTCTGGAAGacgttttttattgttttcgaGACAAATTTTTATCACTTTATCATTACAAACAATTCATCAAGAGGAAAAGTGAGTGTTCATGATTCAACGTAATGCCCACTAGAGTGGCTAAGTATATCTGTTCCTCTATTCTGCATTCATCTATATAAATAACGGTATCATCGCTTATAGACGCTCTTGCAGGCCAATGCAGCTGCCTCTTTTTCACATAACGGAAAGTTCTTGGCGAGAACTTTCTCGACCAATCAAATAAAGAGACGCTAAGTGAAGGCACGACCAAAGCAATGAAGCTGGTCAGACTCCATTGCTTATGGTTTTCTGGAATGCATATTTGGGGAAAATAAAATAGGAAcacttctataaaaaaataaatattctcataatatttatacaaacataaatattatgtatcgaaatatttattttgcactaaAGAGAGTCGCGCTTTCCATAGAAAAtgagtatttaaaaatgtaataaaaaacaattctcaCAGTACAGTTCAGTGTTTCCCCCCCCCCACATAGGCCCACTTAGGTTTACACAGTTTTAGATTGTAGGACAGCATAGTTTAAAATAGACCAATCCCTGCCTGTGCCTTAATTTGTCCTGTTTTTGgcagttttaaaatgtgcttgtgACGATTTATTCCTCAATAAGAAATGATCAGTGGAATAAAGAAATGATCAGTGGAATAATTCTGATGCAGTAGTCAGtctgtaaatgcaaatgttctatgctattaaaaagtatgttgttttttttaaagcattgtgCACACATAATTCAAGTAATTTCAGGTATGACAGACGGCAACTCTACATGATCCAgtcttacaaaaacattatgacactaataatgtaaaacaaaatgtcttcTACACAATTAATATTATGAC

Function

GO:

id name namespace
GO:0033961 cis-stilbene-oxide hydrolase activity molecular_function

KEGG:

id description
K01253 EPHX1; microsomal epoxide hydrolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU205130 lncRNA downstream 119996 15992543 ~ 15993096 (-) False LOC122325494
TU205007 lncRNA downstream 402039 15684176 ~ 15711053 (-) True G138862
TU204996 lncRNA downstream 596022 15516843 ~ 15517070 (-) True G138853
TU204970 lncRNA downstream 732123 15370608 ~ 15380969 (-) True G138828
TU204944 lncRNA downstream 765811 15331801 ~ 15347281 (-) True G138811
TU205173 lncRNA upstream 88626 16207070 ~ 16208001 (-) True G138956
TU205179 lncRNA upstream 95900 16214344 ~ 16216716 (-) True G138960
TU205207 lncRNA upstream 204962 16323406 ~ 16325753 (-) True G138983
TU205210 lncRNA upstream 206218 16324662 ~ 16325753 (-) False G138983
TU205285 lncRNA upstream 332082 16450526 ~ 16451893 (-) True G139029
XM_043219000.1 mRNA downstream 8365 16026759 ~ 16104727 (-) False LOC122324507
XM_043218999.1 mRNA downstream 8367 16026762 ~ 16104725 (-) False LOC122324507
XM_043219001.1 mRNA downstream 8369 16026763 ~ 16104723 (-) False LOC122324507
XM_043219002.1 mRNA downstream 8370 16017318 ~ 16104722 (-) True LOC122324507
XM_043219006.1 mRNA downstream 111922 15993842 ~ 16001170 (-) True LOC122324513
XM_043220576.1 mRNA upstream 180830 16299274 ~ 16302044 (-) True hebp2
XM_043220577.1 mRNA upstream 180830 16299274 ~ 16302042 (-) False hebp2
XM_043218920.1 mRNA upstream 183747 16302191 ~ 16310567 (-) True kif25
XM_043218621.1 mRNA upstream 192442 16310886 ~ 16314723 (-) True acat2
XM_043219400.1 mRNA upstream 196574 16315018 ~ 16321419 (-) True LOC122324754
TU205141 other downstream 76839 16028253 ~ 16036253 (-) False LOC122324507
TU205127 other downstream 119996 15990874 ~ 15993096 (-) False LOC122325494
XR_006247359.1 other downstream 191140 15921733 ~ 15921952 (-) True LOC122325620
XR_006247353.1 other downstream 192091 15920781 ~ 15921001 (-) True LOC122325614
XR_006247357.1 other downstream 192591 15920281 ~ 15920501 (-) True LOC122325618
TU205229 other upstream 243687 16362131 ~ 16363312 (-) False fndc1
TU205232 other upstream 246366 16364810 ~ 16365467 (-) False fndc1
TU205233 other upstream 246366 16364810 ~ 16366772 (-) False fndc1
TU205287 other upstream 337024 16455468 ~ 16462216 (-) True G139030
TU205714 other upstream 1228362 17346806 ~ 17428071 (-) True erh

Expression Profile