Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043219007.1 |
| length | 701 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 8 |
| gene id | LOC122324514 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 15919584 ~ 15922857 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0030097 | hemopoiesis | biological_process |
| GO:0006364 | rRNA processing | biological_process |
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0042274 | ribosomal small subunit biogenesis | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0030686 | 90S preribosome | cellular_component |
| GO:0032040 | small-subunit processome | cellular_component |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02993 | RP-S7e, RPS7; small subunit ribosomal protein S7e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU205007 | lncRNA | downstream | 208531 | 15684176 ~ 15711053 (-) | True | G138862 |
| TU204996 | lncRNA | downstream | 402514 | 15516843 ~ 15517070 (-) | True | G138853 |
| TU204970 | lncRNA | downstream | 538615 | 15370608 ~ 15380969 (-) | True | G138828 |
| TU204944 | lncRNA | downstream | 572303 | 15331801 ~ 15347281 (-) | True | G138811 |
| TU204946 | lncRNA | downstream | 595304 | 15323572 ~ 15324280 (-) | True | G138812 |
| TU205130 | lncRNA | upstream | 69686 | 15992543 ~ 15993096 (-) | False | LOC122325494 |
| TU205173 | lncRNA | upstream | 284213 | 16207070 ~ 16208001 (-) | True | G138956 |
| TU205179 | lncRNA | upstream | 291487 | 16214344 ~ 16216716 (-) | True | G138960 |
| TU205207 | lncRNA | upstream | 400549 | 16323406 ~ 16325753 (-) | True | G138983 |
| TU205210 | lncRNA | upstream | 401805 | 16324662 ~ 16325753 (-) | False | G138983 |
| XM_043220492.1 | mRNA | downstream | 74107 | 15842203 ~ 15845477 (-) | True | LOC122325442 |
| XM_043220182.1 | mRNA | downstream | 397801 | 15519210 ~ 15521783 (-) | True | sox11b |
| XM_043219875.1 | mRNA | downstream | 467573 | 15438737 ~ 15452011 (-) | True | rnf144ab |
| XM_043219877.1 | mRNA | downstream | 467576 | 15438738 ~ 15452008 (-) | False | rnf144ab |
| XM_043218710.1 | mRNA | downstream | 500815 | 15416967 ~ 15418769 (-) | True | id2b |
| XM_043220533.1 | mRNA | upstream | 67292 | 15990149 ~ 15993645 (-) | True | LOC122325494 |
| XM_043219006.1 | mRNA | upstream | 70985 | 15993842 ~ 16001170 (-) | True | LOC122324513 |
| XM_043219002.1 | mRNA | upstream | 94461 | 16017318 ~ 16104722 (-) | True | LOC122324507 |
| XM_043219000.1 | mRNA | upstream | 103902 | 16026759 ~ 16104727 (-) | False | LOC122324507 |
| XM_043218999.1 | mRNA | upstream | 103905 | 16026762 ~ 16104725 (-) | False | LOC122324507 |
| XR_006247352.1 | other | downstream | 75010 | 15844354 ~ 15844574 (-) | True | LOC122325613 |
| XR_006247361.1 | other | downstream | 75955 | 15843409 ~ 15843629 (-) | True | LOC122325622 |
| XR_006247356.1 | other | downstream | 76466 | 15842898 ~ 15843118 (-) | True | LOC122325617 |
| XR_006247350.1 | other | downstream | 76966 | 15842398 ~ 15842618 (-) | True | LOC122325611 |
| XR_006247351.1 | other | downstream | 195354 | 15724010 ~ 15724230 (-) | True | LOC122325612 |
| TU205127 | other | upstream | 68017 | 15990874 ~ 15993096 (-) | False | LOC122325494 |
| TU205141 | other | upstream | 105396 | 16028253 ~ 16036253 (-) | False | LOC122324507 |
| TU205229 | other | upstream | 439274 | 16362131 ~ 16363312 (-) | False | fndc1 |
| TU205232 | other | upstream | 441953 | 16364810 ~ 16365467 (-) | False | fndc1 |
| TU205233 | other | upstream | 441953 | 16364810 ~ 16366772 (-) | False | fndc1 |
