RNA id: XM_043219020.1


Basic Information

Item Value
RNA id XM_043219020.1
length 3756
RNA type mRNA
GC content 0.45
exon number 29
gene id anapc4
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 11824261 ~ 11833692 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGTAGTCATCATTTCATTGGCGGTCAGACTCACGTTTCATTGGTCGCGCTGCCATACTCTGTCTTTATGGACATGAATGTGTGTACAGTACAAATgagaatatattaatatttttttacattcatttctcTGTACGTGTATAATTTAGAAGACGAGCTTGATTGTGGAGTTTATCACTTGTCGTCGTTTATCAGGGTTCAGCAATGCCTGCTTTTCACCAGGTTGGGGAGAAGCAGCTCCCCAACCCCATTCTGTACATGGCCTGGTCTCCTAACAGAGATCTGATCGCCCTGGCTAACACTTCGGGAGAGCTTCTCCTGCATCGGCTTGCCAACTTTCAGCGGGTGTGGAGTTTAATGCCCAATGAGAACACCGGTAAAGAGATCACATCGCTGGCCTGGAGACCTGATGGGAAAGTCCTGGCCTTCAGTGTGGGAGACACAAAGCAGGTGGTGCTGTGTGATGCGGAGAAAGCAGAAATCCTGCACTTGTTTCCTGTTGAATACCCAGCATCCTGCATGCACTGGATGGAGGTGCAAGATGACAGCAGCACATTGTCCTCGTTCAGCGAGTCCGAGGATGAGTCCAGCCGTTTTCTTCCAAAGTTACCCTCTTTACCTAAGAGCTACAGCACCACATCAAAGATATTTAGTGAAGAGAAATCAGATGAAGTCACAAACCTTTTAGGGGAAGTGAGGCTCAATATCCTGGTGGTGGGAGGACCGTCTGGATTCGTGGAGCTGTATGCGTATGGCCTGTATAAGATTGCTACGCTGAGTGGAATCTCAGGGACGTGCCGTAGTCTTGGACTGTCTAGTGACCTCAAGTCCCTCTCTGTTATTACAGAGATTAGATCCACAGAAGACAACCCCGAGATACATTACATACAGCTGGACACCGGTCTGCTGTCTTCATGTTTACCTGAGTTGACCAAAATGGCCCGCAAGTTTACACACATTTCCACACTGCTGCAGTATCTGCGTCTCTCTCTCACCTGCATGTGTGAGGCTTGGGAGGACATTCTTATGCAGATGGACCTCCGTCTCACTAAGTTTGTCCAGGAAAAGAACACAAGCACTCAGGTTCAGGATGAGTTTCTGGAGCTATTATTATGGGGCCATGCAAGCCCTGAACTTCAGGCTCTTCTTATGAATCAACTCACAGTAAAGGGCTTGAAGATGTTGGGTCAGTCCATTGATTCGTCTTATTCCAGCATCCAAAAACTTGTTATCAGTCACTTGCAGAGTGGCTCTGAGGCGCTGCTGTATCATCTGAGCGAGGTCAAAGGAATGGCGCTCTGGAAACAGAAGTTTCAACCTCTCGGCCTGGATCCTGCAGCCATCGAGGATGCCATTGTAGCCGTGGGCTCTTTTACCCTGAAGGCCAGTGAACTTTTGCAAGTTATAGACAAAAGTATGAAGAACTTCAAAGCCTTTTTCAGATGGCTGTATGTTGcAATGCTTCGAATGTCAGAAGATCACGTTCCTCCTGAGCTTAACAAGATGACTCAGAAGGATCTGGCTTTTGTGGCTGACTTTCTGTCTGAGCATTTCAGTGCTAATGAGGAGCTGTTTGATCGGAAAGGGAAGTATTTCAATGTTGAGCGCGTCGGACAGtacttgaaggatgaagatgaagactTGGTATCTCCACCCAACATGGAGGGCAACCAGTGGGTGACCTTTGTAAAGCAGAGCACTTGCCTGAAAGACAGTCCATTACTCTTTCCCACTTACCCACAGAAGTCTCTGCACTTTGTCAAGAGAATGATGGAGGGGTCCATTGATTTGTGCTTACAGAAACCGGCCgagGTGATTGGCCATTCAGTAAAACAAGCTGTGTGTTTGCCACTGTACACTGTCCCTGAGAGCTCTGAAAATACACCGAGATTGTTTGAGCTGCCTTCATTgtGGAATGATAAGAAGGCTGGTATGCATTATGTAGTGTTCTGCATGCCTGAGATCTCGCCCtctaaaatctatattttgagGAGAGCAACAGACCCCAACAGGTCTGTCCCTAACGGTCTGGTAGCCTTAAACCTCAACACTCCTCTCAATTCTAGCATAGATGATGAAACGCCTGCACCAGCTTCTGCtGACAGTTCGTACGGTTGCCTTGATGCCCGTTTTTATGATGACGAGACATTGACGGTGGTATTGCGAAGTCTGGATGATGACGAGAATAAGATGCGTGTCCTCGCTCAGCTTCATCTAAACTCTGCTTTGAGCTGGGATGAAGAGTTCACCTGGGACCTTACGCTCAGGCTGGAGCAGCAGACTGAAGGGATCCCGGTCCAGGGTTTGACCTGGGGAAACCAGAGCAGAGAGATGGACAACATCAAGGCACAGTTTGTGGCAGTTAATGGGATCCGCAAAGTGGCCTGCGTGCTCAGTGCCAATCTGAGACATGTACGTGTGTTTGAGATGGAtgcagaggaggaagaggaggaggaagagcgTGCTGATGAGTCACAGGAAATGAGCTCGGACCAGGACAGACTCGAGGACACAATGACTAATCAGAGTGATGCTGGTGAAGATGGAGCAGGAGGAGCCGAGGAGGCTCAGGTGGCAGGTCAAGGCTCAGGAGATGTCTTGAATGAGACTGCAGGATCAGACACACTTTGAACTCTGACCTGAGATCCAACACGTTATCCACAACTGAACTATGGACTCCTCTGTTAATCCTGGTCTTGtcctttttgtattaaaaatattttgtgataaaGATGATCTAATGAACATTTCACAGCctgatttgtaaataaatggaTTCACTGTGTGCTAATCTTGAGTTTTATCAATCAATGCACTATTCACAGTCCACCGTGATTAATTAATCCCATTAGTGAAAGTTTCATAACACTTGAGTGAGTTGTTCAGCTAGTCATGTGACCTCTGACAGAGTGCAACAGTCAGGTtatagtcataaaaaaaaaaaaacattttcaccaaAGGGGTTATCAATTGATTCTGCATGCTTCTGATGAAGCCATCAGCCAGCATTTGTAGGCTTATTCTTAAGTAAGAAGAATAAGCCTACAAATGACATGGTGAAAACGACATTACCCATGATTCACAAATCAGGGAATCATTACAAGGTGCCAAAAAAACGTTTTAGTGCCCACCCACCTCCATGATCAATGTGAATATTGTAGATTTAGTTTCTACTAACTGTCATGGGATTGTCTTTACCTTATTTAAACCAATACATACAATTCTTttagtttgatttgattttgctTGAATTAGGAGTTCGTAATGTGGTTCACCTCATAGCTGGTAGGGTGGTTCATGGCTTAAAACTATAAGAAAAATACCTCTGGAACCAAGGTTGCTGAAAAACTGTTGCACTCTTAGAATATTGAAATGACttgagtgatttatttttttctaatatactGGGGGTTAGCGGGCAGTTTGTGACCCTCGGGTCTGGGAAGGTCGAAAATCCTGCCCTAGTGCATTAACAACCTCTaagtctttctttcttgctcacctgaaaataaaaagttcagtCACTTCAACTCATGAGTATGATGGAGCAAACGTTTTAAGGTCCTAATCCAAATTTATCCCTATGGGCAAAACGGTAAATCCTAATGTGCAGTCCCTCTGGCTGATGGCATTTTTCTGCAAATGGTATCCTTGGATGGGCTTAGAAGAAGTACGTTGCATGTTCAAATAAGgccaaaaatagaaaactaaatcaatgaaaaaaaaataatcctaaTAATCCTAAACACCAAGACA

Function

GO:

id name namespace
GO:0031145 anaphase-promoting complex-dependent catabolic process biological_process
GO:0030071 regulation of mitotic metaphase/anaphase transition biological_process
GO:0005680 anaphase-promoting complex cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203482 lncRNA downstream 26497 11792550 ~ 11797951 (-) True G137784
TU203514 lncRNA downstream 52788 11771269 ~ 11771660 (-) True G137812
TU203474 lncRNA downstream 73276 11717238 ~ 11751172 (-) True G137779
TU203475 lncRNA downstream 98214 11717238 ~ 11726234 (-) False G137779
TU203435 lncRNA downstream 193433 11628624 ~ 11631015 (-) True G137748
TU203524 lncRNA upstream 2414 11836106 ~ 11836716 (-) True G137821
TU203525 lncRNA upstream 4778 11838470 ~ 11839366 (-) True G137822
TU203535 lncRNA upstream 59575 11893267 ~ 11893889 (-) True G137831
TU203664 lncRNA upstream 111566 11945258 ~ 12013976 (-) True G137916
TU203678 lncRNA upstream 201786 12035478 ~ 12036122 (-) True G137930
XM_043219022.1 mRNA downstream 1613 11804674 ~ 11822835 (-) True slain2
XM_043219024.1 mRNA downstream 1616 11804674 ~ 11822832 (-) False slain2
XM_043219023.1 mRNA downstream 1623 11804674 ~ 11822825 (-) False slain2
XM_043219025.1 mRNA downstream 1625 11804674 ~ 11822823 (-) False slain2
XM_043219026.1 mRNA downstream 22924 11798020 ~ 11801524 (-) True slc10a4
XM_043219029.1 mRNA upstream 73868 11907560 ~ 11910735 (-) True cbr4
XM_043220525.1 mRNA upstream 225983 12059675 ~ 12064023 (-) True LOC122325482
XM_043219074.1 mRNA upstream 344208 12177900 ~ 12181346 (-) False LOC122324547
XM_043219073.1 mRNA upstream 344208 12177900 ~ 12181346 (-) True LOC122324547
XM_043219075.1 mRNA upstream 348087 12181779 ~ 12185425 (-) True LOC122324548
TU203468 other downstream 141130 11682405 ~ 11683318 (-) True G137773
XR_006247366.1 other downstream 194087 11630241 ~ 11630361 (-) True LOC122325627
XR_006247365.1 other downstream 194607 11629720 ~ 11629841 (-) True LOC122325626
XR_006247367.1 other downstream 195199 11629128 ~ 11629249 (-) True LOC122325628
XR_006247255.1 other downstream 455958 11366923 ~ 11368490 (-) False gsx2
TU203734 other upstream 385071 12218763 ~ 12219639 (-) True G137967
TU203715 other upstream 389118 12222810 ~ 12224270 (-) True G137949
TU203701 other upstream 412530 12246222 ~ 12247010 (-) False mdn1
XR_006247291.1 other upstream 1591783 13425475 ~ 13436351 (-) False cracd
TU204189 other upstream 1830814 13664506 ~ 13692007 (-) True G138285

Expression Profile