Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043219038.1 |
| length | 1403 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | LOC122324531 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 7608132 ~ 7620574 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0008301 | DNA binding, bending | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU201981 | lncRNA | downstream | 6590 | 7590586 ~ 7601542 (-) | True | LOC122324530 |
| TU201983 | lncRNA | downstream | 9418 | 7544356 ~ 7598714 (-) | False | LOC122324530 |
| TU201970 | lncRNA | downstream | 120721 | 7485893 ~ 7487411 (-) | True | G136724 |
| TU201952 | lncRNA | downstream | 211840 | 7360867 ~ 7396292 (-) | False | G136717 |
| TU201951 | lncRNA | downstream | 211840 | 7394026 ~ 7396292 (-) | True | G136717 |
| TU202029 | lncRNA | upstream | 49006 | 7669580 ~ 7771831 (-) | True | G136772 |
| TU202035 | lncRNA | upstream | 55369 | 7675943 ~ 7677043 (-) | True | G136774 |
| TU202019 | lncRNA | upstream | 56542 | 7677116 ~ 7782233 (-) | True | G136763 |
| TU202030 | lncRNA | upstream | 150353 | 7770927 ~ 7771831 (-) | False | G136772 |
| TU202004 | lncRNA | upstream | 165031 | 7785605 ~ 7788841 (-) | False | zyg11 |
| XM_043219037.1 | mRNA | downstream | 6530 | 7594261 ~ 7601602 (-) | False | LOC122324530 |
| XM_043220186.1 | mRNA | downstream | 171634 | 7432060 ~ 7436498 (-) | True | LOC122325222 |
| XM_043220585.1 | mRNA | downstream | 178850 | 7424836 ~ 7429282 (-) | True | LOC122325546 |
| XM_043219546.1 | mRNA | downstream | 237937 | 7368311 ~ 7370195 (-) | True | nfkbiaa |
| XM_043219604.1 | mRNA | downstream | 267677 | 7335388 ~ 7340455 (-) | True | LOC122324874 |
| XM_043219292.1 | mRNA | upstream | 165028 | 7785602 ~ 7799589 (-) | True | zyg11 |
| XM_043219291.1 | mRNA | upstream | 165028 | 7785602 ~ 7799589 (-) | False | zyg11 |
| XM_043219131.1 | mRNA | upstream | 236448 | 7857022 ~ 7874571 (-) | True | angptl1a |
| XM_043219114.1 | mRNA | upstream | 360105 | 7980679 ~ 7983050 (-) | True | faslg |
| XM_043219116.1 | mRNA | upstream | 365317 | 7985891 ~ 7992309 (-) | False | si:dkey-86e18.1 |
| XR_006247193.1 | other | downstream | 6530 | 7590578 ~ 7601602 (-) | False | LOC122324530 |
| XR_006247310.1 | other | downstream | 67892 | 7540125 ~ 7540240 (-) | True | LOC122325568 |
| TU201966 | other | downstream | 171778 | 7433232 ~ 7436354 (-) | False | LOC122325222 |
| TU201941 | other | downstream | 178864 | 7426669 ~ 7429268 (-) | False | LOC122325546 |
| TU201958 | other | downstream | 267696 | 7336151 ~ 7340436 (-) | False | LOC122324874 |
| TU202009 | other | upstream | 73381 | 7693955 ~ 7696065 (-) | True | G136754 |
| TU202297 | other | upstream | 702539 | 8323113 ~ 8644759 (-) | False | pigc |
| TU202296 | other | upstream | 711193 | 8331767 ~ 8644759 (-) | False | pigc |
| TU202293 | other | upstream | 760920 | 8381494 ~ 8644759 (-) | True | pigc |
| TU202479 | other | upstream | 1198280 | 8818854 ~ 8819327 (-) | True | G137054 |
