RNA id: XM_043219427.1


Basic Information

Item Value
RNA id XM_043219427.1
length 3204
RNA type mRNA
GC content 0.54
exon number 10
gene id grm1a
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16814705 ~ 16840062 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

agagagagagagagagagagagagagagctcctCTAGCTGGGCTGCACACTGATAACTGAAGTATATCATCAGTGCAGCAGCTGTCTTAGAAGAAGGTAAAGCGATGTCTCATTGACTCAGGTGTCAGGGCGCATTCATGTGGTCTCGCGTGCGCATCATGGTCCCTTAATTGAATCTGGGACTGCAGAGAAACGAGCACCGCTGGCACGAGCAGCTCGCGAGCTATGCCCGTCGCACAATGTGGAACATGGCACGCTTGAAGATGCCCTGGGTCTCGTGCGGACACTTTATACTTTTCCTGTGTCTGCTTCCACCGACACTCTCATCTCACGCGCTTGGAAACATATACAAGCGTTCGGCGGTCCAGCGCGCGGCGGCCCGGTCTGTCGCCCGCATGGATGGCGACGTGATCATCGGCGCGCTGTTCTCCGTGCACCACCAGCCGTCCGCCGAGCGTGTGGCCGAGAGAAAATGCGGAGACGTGAGGGAGCAGTACGGCATCCAGCGGGTGGAAGCGATGTTCTATACGCTGGACCGTATTAACTCGGACCAGTACCTGCTGCCCAACATCACTCTGGGCTGCGAGATCCGGGACTCGTGCTGGCACTCTTCCGTGGCGTTAGAGCAGAGCATCGAGTTCATTCGAGACTCCCTCATCTCTATTCGGGATGACAAAGACGGATCTAAGTGGTGCATCGACGGGACCCCTTCCAACCAGCCGCCTCCTAGCAAGAAGCCCATCGCTGGAGTCATAGGTCCGGGCTCCAGCTCGGTGGCCATCCAGGTGCAGAATCTCCTCCAGCTGTTTAACATCCCGCAAATTGCTTATTCGGCAACCAGCATAGACCTGAGCGACAAAACCCTTTTCAAATACTTCCTCCGTGTCGTGCCCTCTGACACGCTGCAGGCGCGCGCTATGCTCGACATTGTCAAACACTATAACTGGACGTACGTGTCTGCGGTTCACACGGAGGGTAACTATGGAGAGAGTGGCATGGAGGCCTTTAAGGAGTTGGCCGCAGAGGAGGGTCTATGTATCGCCCACTCTGATAAGATATACAGTAATGCTGGAGAAAAGCACTTTGACCGTCTGCTTAAGAAACTGCGGGAGCGTCTGCCCAAAGCCCGCGTGGTCGTCTGCTTTTGTGAAGGAATGACTGTCCGTGGCCTGCTCATGGCCATGCGGCGCCGTGGGGTTTCTGGAGAGTTCCAGCTAATTGGAAGCGATGGCTGGGCAGATCGCGATGAGGTGGTGGAAGGATATGAGCAGGAGGCAGATGGTGGGATCACAATGAAGTTGCAAACAGAAGAGGTTCAGTCATTTAATGACTATTTTCTGAAGCTGCGTCTGGACACCAACACAAGGAACCCATGGTTTGCCGAGTTCTGGCAGTACCGCTTCCAGTGCCGCATTCCTGGTCATCCCCAGGAGAACCATAACTACCAGAAAATCTGCACAGGTGATATAGGAAATGAGAGCCTGAAAGACAACTATGTCCAGGACAGCAAGATGGGCTTCGTGATCAATGCAATTTATGCGATGGCTCATGGTCTTCAAGATATGCATAAAGAGCTGTGTCCTGACTATGTTGGCCTGTGCGAGGCAATGGACCCTATTGATGGCAGTAAGCTGCTGGACTATCTGCTGAAGACCTCTTTTAGTGGTGTATCTGGGGAGGAAGTCTACTTTGATGTAAATGGAGACTCACCTGGGAGGTATGATATTATGAATCTTCAGTATGTGGAGGAGCTGGGCCGCTATGATTACATTAATGTGGGGTCGTGGCATGAAGGTCTCCTGAGCATCAGTGATTATAAACTCATGACAAACCGCACTGAAATGGTCCGATCTGTCTGCAGTGAACCGTGTTCTAAGGGACAGATCAAGGTGATCCGTAAAGGAGAAGTGAGTTGCTGCTGGATCTGCACTACATGTAAAGATAATGAATATGTTCAAGATGAGTTCACATGCAGAGCTTGTGACCTGGGCTGGTGGCCTGATGATGAACTGGCAGAATGCAAGCCTCTCCCACTAAAATATCTGGAGTGGAGCAGCGTGGAGTCCATCATCGCAGTGGTGTTCTCCTGCCTCGGTATCCTGATAACTCTGTTCGTCACATTCATCTTCATCCAGTACCGCGACACGCCGGTGGTGAAGTCCTCCAGTCGTGAGCTTTGCTACATCATCCTTGCGGGTATCTTCCTTGGCTACATCTGCCCCTTCACTCTCATTGCACGTCCTACTGTGATCTCCTGTTACCTGCAGCGCCTTCTAGTGGGCTTGTCGTCTGCCATGTGCTACTCCGCCCTGGTAACCAAAACCAACCGCATCGCACGCATCCTGGCTGGCAGCAAGAAGAAAATCTGCACACGCAAGCCCCGCTTCATGAGCGCCTGGGCGCAGGTGGTAATCGCCTTCATCCTGATCAGTCTCCAGCTGGCCGTGGTGGTTACGCTGATTGTGCTGGAACCCCCCGAGCCAGTGAAGAGCTACCCCAGCATCAGGGAGGTGTACCTCATCTGTAACACGAGTAACTTGGGCGTAGTGGCTCCGTTGGGTTACAACGGCCTGCTTATCATGAGCTGCACCTACTACGCTTTCAAGACCCGCAACGTGCCTGCCAACTTTAACGAAGCCAAGTACATCGCATTCACCATGTACACCACCTGCATTATCTGGCTGGCTTTTGTGCCCATCTACTTCGGCTCCAACTATAAGATCATCACCACCTCTTTCTCAGTCAGTCTCAGTGTTACTGTGGCACTGGGTTGCATGTTCACGCCCAAGATGTACATCATCATCGCCAAGCCCGAGCGCAACGTACGCAGCGCATTTACGACCTCAGACGTGGTTCGAATGCACGTGGGCGACGGGAAGGCAGCTCCTTGCCAGAGCAACAGCATCCTCAACATGTTTCGGAGgaagaagaacaacaacaacgcTACCGGCAGCACCAAGTGCCAGACCCCAGGGGAGGGGGTCGAGTGTGTTCCACAGACTGTCTGTGCATGTGAGGAGGCAAGCGGTCGGCCAGAGTCAGACGGCGGTCATACGACCCCTAACTAATGCCTCACAACCCCCCGAGTCTGAATATGATGCTGGCCTCAACACAGCCCCCAATGGCTCTCACCCCGACAACAAGGATCTCTACAACCTCAGCGAGGGGCACGATGGGGGTCCCCAACATCCTACAACCCACGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU205289 lncRNA downstream 361196 16454884 ~ 16455403 (-) True G139032
TU205285 lncRNA downstream 364706 16450526 ~ 16451893 (-) True G139029
TU205207 lncRNA downstream 490846 16323406 ~ 16325753 (-) True G138983
TU205210 lncRNA downstream 490846 16324662 ~ 16325753 (-) False G138983
TU205179 lncRNA downstream 599883 16214344 ~ 16216716 (-) True G138960
TU205435 lncRNA upstream 3156 16843218 ~ 16845168 (-) True G139139
TU205444 lncRNA upstream 10492 16850554 ~ 16946540 (-) True G139145
TU205448 lncRNA upstream 19281 16859343 ~ 16860256 (-) True G139147
TU205451 lncRNA upstream 20264 16860326 ~ 16896383 (-) True G139149
TU205449 lncRNA upstream 49877 16889939 ~ 16891460 (-) True G139148
XM_043219428.1 mRNA downstream 2455 16799760 ~ 16814144 (-) True rab32a
XM_043218921.1 mRNA downstream 18122 16765715 ~ 16798477 (-) True adgb
XM_043219756.1 mRNA downstream 56118 16691307 ~ 16760481 (-) True stxbp5a
XM_043219078.1 mRNA upstream 15233 16855295 ~ 16858610 (-) True cep57l1
XM_043219077.1 mRNA upstream 15233 16855295 ~ 16858606 (-) False cep57l1
XM_043219285.1 mRNA upstream 56499 16896561 ~ 16911932 (-) False armc2
XM_043219284.1 mRNA upstream 56499 16896561 ~ 16911932 (-) True armc2
XM_043219287.1 mRNA upstream 81576 16921638 ~ 16947178 (-) False foxo3b
TU205287 other downstream 354383 16455468 ~ 16462216 (-) True G139030
TU205233 other downstream 449827 16364810 ~ 16366772 (-) False fndc1
TU205232 other downstream 451132 16364810 ~ 16365467 (-) False fndc1
TU205229 other downstream 453287 16362131 ~ 16363312 (-) False fndc1
TU205141 other downstream 780346 16028253 ~ 16036253 (-) False LOC122324507
TU205714 other upstream 506744 17346806 ~ 17428071 (-) True erh
TU205713 other upstream 585806 17425868 ~ 17428071 (-) False erh
XR_006247229.1 other upstream 970212 17810274 ~ 17824201 (-) False swt1
XR_006247304.1 other upstream 1503410 18343472 ~ 18350122 (-) True adgrf3b
TU206351 other upstream 1565965 18406027 ~ 18446949 (-) False G139706

Expression Profile