RNA id: XM_043219768.1


Basic Information

Item Value
RNA id XM_043219768.1
length 3099
RNA type mRNA
GC content 0.49
exon number 15
gene id wdr26b
representative False

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21699406 ~ 21713062 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCTCCAGAGCAACGCAGGCTCGGCTTCGGGGGCCTCCGGGACTGGTTCGGGTTccctgaagaagaagaagcgtCTGTCTCAGGCGGAGGAAGACGTGATCCGCCTCATCGGACAGCATCTGCACGGCTTGGGGCTGAAATGGGATGCGAGCAGTACTCGAGGCGCTAGCCGTTGTTTTACTCAAAGGTGGCAAATAGGATCAGTCAAGCTTCAGTTATTGTTTTCTCTAAAGTCAGACGGTGGATTTGTTGATGCAGGAATCCGGTTGTAGACTGGAGCATCCGTCAGCCACTAAATTCCGGAACCACGTCATGGAAGGTGAATGGGACAAGGCTGAAAACGACCTCAACGAGCTGAAAGCATTGATGCATTCACCCAACGCTATTGTGCGGATGAAGTTTCTGCTATTACAGCAGAAGTATCTGGAGTATTTGGAGGACGGAAAAGTTCTGGAAGCTCTGCAAGTGTTGAGAGGAGAGTTGACTCCGCTCAAATACAACACAGATCGAATCCACGTGCTCAGCGGgtatCTGATGTGCAGTCACCCTGAGGATCTGAAGGCAAAGGCTGAATGGGAGGGAAAAGGCGCTGGATCACGATGTAGATTACTGGACAAACTCCAGAcgtACTTGCCCCCCTCTGTAATGTTGCCCCCTCGGCGGCTGCAGACACTGCTCAGACAAGCCGTGGAGATGCAGAGAGATCGCTGCCTTTATCACAACACCAAACTGGACTCCAGTCTGGACTCTGTGTCCTTACTGCTGGATCACGTCTGCAGCAGGAAACAGTTTCCCTGTTACACGCAGCAGATCCTCACAGAGCACTGCAATGAAGTCTGGTTCTGCAAGTTCTCCAACGACGGCACTAAACTCGCCACCGGCTCAAAAGACACAACTGTGATTATCTGGCAGGTGGAACCGgaCTCTCATCAGCTGAAGCTTGTGCGGACTCTGGAGGGTCACGCATATGGTGTGTCGTATCTTGCCTGGAGCCCTGATGATGTTTACCTGATCGCCTGCGGTCCTGACGACTGCTCCGAGCTCTGGTTATGGAACGTTCAGACAGGAGAACTGCGGACAAAGATGAGTCAGTCTCATGAGGACAGCCTGACCAGCGTGGCCTGGAACCCTGATGGAAAGCGCTTTGTTACAGGAGGACAGAGAGGGCAGTTCTACCAGTGTGATCTTGACGGAAACCTGTTGGAGTCATGGGAAGGCGTTCGTGTGCAGTGCCTGTGGTGTATGACCGACGGCCGGACTGTTCTCGCCTCTGATACGCACCAGAGGATCCGTGGCTACAGTTTCGAGGACCTAACAGACAGAAACATAGTTCAGGAGGATCATCCTATAATGTCTTTCACTGTTTCTAAGAATGGAAGATTAGCTTTGTTAAATGTAGCAACTCAGGGTGTTCATCTCTGGGACCTACAGGACCGTGTGTTGGTCAGGAAGTATCAAGGTGTGACACAGGGTTTCTACACCATTCACTCCTGCTTCGGTGGACACAACGAGGATTTCATCGCTAGCGGCAGTGAAGATCATAAGGTATATATTTGGCACAAGCGCAGCGAGCTGCCGATCGTGGAGTTGACGGGACACACGCGCACAGTGAACTGTGTCAGCTGGAACCCCTGTATTCCCAGTCTTATGGCCAGCGCTTCTGACGACGGCACAGTCCGTATCTGGGGACCTGCACCCTTCCTGGACGCACAAGAGCTGGACGGCCTCAATGAGAGCTGCAGCAGTATGGACAGTTGATGGCAGCCCTGGAACAGATGACTCGTCGCATTGGAAAAATGCAAAATccaacagagaaaaacacaattacAGCATTGTCCTCCTCCACAACGACGCACGAGCGCAAACGCGAAAGAGATTCAGAGCCTGGCTTTCAAGAGTCCGGAGGCAGCAGAGACCTGACGCTGATCCGACCCGCTTCCATACCGACGGATCTGATCTCTTTCCCTCTGCGGGATTCCCGTGGCTGTTCCCATTAATTACCCTTTCATTAGTCCTGAAGACGAGAGCTGGAGCGCCCGGGCGGGTGTAATAAACTCACACTCAatgttcttctctctctctcgctcccgATCCTCCAGCGGCAGAGGAcgaagcactttttttaaaaagaaatactagTCCTAGCAATTCTCTCTTTTGTTCCTTTAGCAGCTGATCAGCTTGGGCTTTAGTGTTGATGGAGTGCtgtagtttttctgtttttttttttttaatctttcaaaacacaaatgcattggTTTCAACCGGACTCCCATGCATCAGTAGGGGTCAAAGGTCGCCGTTTCGACTGAATTCTGCTTCAGCCTCCCTCCTGTAGCACAgccgtgtgtttgtttgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtgtatggGCGTTCAAATGTGCCTAAAGTTGGTGTACGTTCGCATGTGgcactgttttttttcacaccaGCTCGAGTGTGTCCCTTGTTTAGCCgtacaaatcattttaacagaATCTGACCGAAGCCCCAGAGACCTTCATCTGTGGATCAAAAACTtgagaaccatttttttttttttttttttgatttttaaagaaagctgttaGCGAAGTTCCTTGTTTTCACCACTTACCTTAGAGGTGGCGTTCGGGAGAGAGACTTTGTTATATTagtacaaatttaaattaactttgAGGGCGAAACGCACAGCTTTAAACAGAAAGATACTGTGACACTCAAACTGTCAATCAGATTTTCGGCTCCTGATGAGGAGTTTGTGGCGTATAAATGACCTATGCAGCAACGTTTGAGCTGAGAGCCCCGTATAATGTTTCTCGCAGCAGCCATACCAGCAGTAAAATAAACCGTCTCTGACCGCACTACATATCCACAACAATTTCATCCTGTGCGCTAGTTGAGTTATATCCACTCAGTCACCTTTCCTGAGCTGTTTACACCAAATATCCGGCTTTTCAATCCCATTTTTGAAGAGAAATGTTTGCTATGGACTgatattaaatgtttgaaaagaatTGCTTTTCTGCCTGTTTTTATGGAAGTTTTTGTTACTTTCTTtggtttaaaatttttttttttttctttggtt

Function

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207881 lncRNA downstream 131 21698420 ~ 21699275 (-) True G140807
TU207904 lncRNA downstream 27482 21576838 ~ 21671924 (-) True G140824
TU207906 lncRNA downstream 131046 21567633 ~ 21568360 (-) True G140826
TU207896 lncRNA downstream 147175 21549084 ~ 21552231 (-) True G140817
XR_006247240.1 lncRNA downstream 186923 21507244 ~ 21512483 (-) True LOC122324936
TU207947 lncRNA upstream 14998 21727653 ~ 21768597 (-) False G140859
TU207948 lncRNA upstream 14998 21727653 ~ 21768597 (-) False G140859
TU207946 lncRNA upstream 54294 21766949 ~ 21768597 (-) True G140859
TU207872 lncRNA upstream 58375 21771030 ~ 21774369 (-) True G140801
TU207986 lncRNA upstream 127860 21840515 ~ 21840765 (-) True G140882
XM_043220185.1 mRNA downstream 1712 21690418 ~ 21697694 (-) True fez2b
XM_043220184.1 mRNA downstream 1713 21690418 ~ 21697693 (-) False fez2b
XM_043220238.1 mRNA downstream 43842 21640329 ~ 21655564 (-) False lpin1b
XM_043220239.1 mRNA downstream 45390 21640329 ~ 21654016 (-) True lpin1b
XM_043220050.1 mRNA downstream 59860 21630270 ~ 21639546 (-) True gnpat2
XM_043219766.1 mRNA upstream 829 21713484 ~ 21730228 (-) False LOC122324966
XM_043219765.1 mRNA upstream 829 21713484 ~ 21730228 (-) True LOC122324966
XM_043220634.1 mRNA upstream 19889 21732544 ~ 21741077 (-) True batf
XM_043220461.1 mRNA upstream 38221 21750876 ~ 21755193 (-) True jdp2b
XM_043220462.1 mRNA upstream 38221 21750876 ~ 21755189 (-) False jdp2b
TU207887 other downstream 187053 21509629 ~ 21512353 (-) False LOC122324936
TU207613 other downstream 420665 21198710 ~ 21278741 (-) True G140616
TU207486 other downstream 723656 20973404 ~ 20975750 (-) False crnkl1
TU207179 other downstream 1636429 20061602 ~ 20062977 (-) True G140277
TU207100 other downstream 1640907 20057624 ~ 20058499 (-) False G140227
TU207950 other upstream 19891 21732546 ~ 21741004 (-) False batf
TU207987 other upstream 128458 21841113 ~ 21841468 (-) True G140883
TU207994 other upstream 133151 21845806 ~ 21846917 (-) False LOC122325102
TU208103 other upstream 399947 22112602 ~ 22113044 (-) True G140972
unassigned_transcript_2511 other upstream 402383 22115038 ~ 22115120 (-) True trnal-uaa_36

Expression Profile