Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043220026.1 |
| length | 1331 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | gsx2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056718.1 |
| NCBI id | CM032087.1 |
| chromosome length | 27616869 |
| location | 11366923 ~ 11368490 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K09310 | GSH; homeobox protein GSH |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU203293 | lncRNA | downstream | 139558 | 11215226 ~ 11227365 (-) | True | G137644 |
| TU203252 | lncRNA | downstream | 172076 | 11191659 ~ 11194847 (-) | True | G137621 |
| XR_006247254.1 | lncRNA | downstream | 251998 | 11113796 ~ 11114925 (-) | True | LOC122325111 |
| TU203241 | lncRNA | downstream | 252090 | 11113891 ~ 11114833 (-) | False | LOC122325111 |
| XR_006247259.1 | lncRNA | downstream | 429573 | 10934946 ~ 10937350 (-) | False | LOC122325152 |
| TU203440 | lncRNA | upstream | 243533 | 11612023 ~ 11613622 (-) | True | G137751 |
| XR_006247149.1 | lncRNA | upstream | 255103 | 11623593 ~ 11631094 (-) | False | LOC122324332 |
| XR_006247148.1 | lncRNA | upstream | 255103 | 11623593 ~ 11631094 (-) | False | LOC122324332 |
| XR_006247147.1 | lncRNA | upstream | 255103 | 11623593 ~ 11631093 (-) | False | LOC122324332 |
| XR_006247146.1 | lncRNA | upstream | 255103 | 11623593 ~ 11631090 (-) | True | LOC122324332 |
| XM_043220053.1 | mRNA | downstream | 6884 | 11339863 ~ 11360039 (-) | True | pdgfra |
| XM_043220208.1 | mRNA | downstream | 47004 | 11301144 ~ 11319919 (-) | True | kita |
| XM_043220522.1 | mRNA | downstream | 184740 | 11141945 ~ 11182183 (-) | True | LOC122325476 |
| XM_043218785.1 | mRNA | downstream | 230311 | 11131424 ~ 11136612 (-) | True | LOC122324412 |
| XM_043218784.1 | mRNA | downstream | 299517 | 11061914 ~ 11067406 (-) | True | si:ch211-142k18.1 |
| XM_043220158.1 | mRNA | upstream | 115647 | 11484137 ~ 11506327 (-) | True | fip1l1a |
| XM_043220584.1 | mRNA | upstream | 236140 | 11604630 ~ 11607753 (-) | True | rasl11b |
| XM_043218909.1 | mRNA | upstream | 300650 | 11669140 ~ 11676648 (-) | True | spata18 |
| XM_043218910.1 | mRNA | upstream | 301698 | 11670188 ~ 11676651 (-) | False | spata18 |
| XM_043218819.1 | mRNA | upstream | 324292 | 11692782 ~ 11704023 (-) | False | dcun1d4 |
| TU203250 | other | downstream | 184754 | 11175194 ~ 11182169 (-) | False | LOC122325476 |
| TU203246 | other | downstream | 230335 | 11132626 ~ 11136588 (-) | False | LOC122324412 |
| unassigned_transcript_2506 | other | downstream | 434279 | 10932562 ~ 10932644 (-) | True | trnal-cag_34 |
| TU203048 | other | downstream | 642854 | 10721921 ~ 10724069 (-) | True | G137469 |
| TU203003 | other | downstream | 796186 | 10567297 ~ 10570737 (-) | True | G137451 |
| XR_006247367.1 | other | upstream | 260638 | 11629128 ~ 11629249 (-) | True | LOC122325628 |
| XR_006247365.1 | other | upstream | 261230 | 11629720 ~ 11629841 (-) | True | LOC122325626 |
| XR_006247366.1 | other | upstream | 261751 | 11630241 ~ 11630361 (-) | True | LOC122325627 |
| TU203468 | other | upstream | 313915 | 11682405 ~ 11683318 (-) | True | G137773 |
| TU203734 | other | upstream | 850273 | 12218763 ~ 12219639 (-) | True | G137967 |
